LOCUS AK292032 1407 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76919 complete cds, highly similar to Homo
sapiens retinoic acid receptor, beta (RARB), transcript variant 1,
mRNA.
ACCESSION AK292032
VERSION AK292032.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1407)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1407
/clone="SPLEN2024992"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000424829"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 20..1366
/codon_start=1
/note="highly similar to Homo sapiens retinoic acid
receptor, beta (RARB), transcript variant 1, mRNA"
/protein_id="BAF84721.1"
/transl_table=1
/translation="MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTE
WQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCK
GFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK
ETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLW
DKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDT
MTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQD
LEEPTKIDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLK
MEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTAEHSPSISPSSVENSGVSQSPLVQ"
BASE COUNT 417 a 360 c 308 g 322 t
ORIGIN
1 attcagtgca agggagatca tgtttgactg tatggatgtt ctgtcagtga gtcctgggca
61 aatcctggat ttctacactg cgagtccgtc ttcctgcatg ctccaggaga aagctctcaa
121 agcatgcttc agtggattga cccaaaccga atggcagcat cggcacactg ctcaatcaat
181 tgaaacacag agcaccagct ctgaggaact cgtcccaagc cccccatctc cacttcctcc
241 ccctcgagtg tacaaaccct gcttcgtctg ccaggacaaa tcatcagggt accactatgg
301 ggtcagcgcc tgtgagggat gtaagggctt tttccgcaga agtattcaga agaatatgat
361 ttacacttgt caccgagata agaactgtgt tattaataaa gtcaccagga atcgatgcca
421 atactgtcga ctccagaagt gctttgaagt gggaatgtcc aaagaatctg tcaggaatga
481 caggaacaag aaaaagaagg agacttcgaa gcaagaatgc acagagagct atgaaatgac
541 agctgagttg gacgatctca cagagaagat ccgaaaagct caccaggaaa ctttcccttc
601 actctgccag ctgggtaaat acaccacgaa ttccagtgct gaccatcgag tccgactgga
661 cctgggcctc tgggacaaat tcagtgaact ggccaccaag tgcattatta agatcgtgga
721 gtttgctaaa cgtctgcctg gtttcactgg cttgaccatc gcagaccaaa ttaccctgct
781 gaaggccgcc tgcctggaca tcctgattct tagaatttgc accaggtata ccccagaaca
841 agacaccatg actttctcag acggccttac cctaaatcga actcagatgc acaatgctgg
901 atttggtcct ctgactgacc ttgtgttcac ctttgccaac cagctcctgc ctttggaaat
961 ggatgacaca gaaacaggcc ttctcagtgc catctgctta atctgtggag accgccagga
1021 ccttgaggaa ccgacaaaaa tagataagct acaagaacca ttgctggaag cactaaaaat
1081 ttatatcaga aaaagacgac ccagcaagcc tcacatgttt ccaaagatct taatgaaaat
1141 cacagatctc cgtagcatca gtgctaaagg tgcagagcgt gtaattacct tgaaaatgga
1201 aattcctgga tcaatgccac ctctcattca agaaatgctg gagaattctg aaggacatga
1261 acccttgacc ccaagttcaa gtgggaacac agcagagcac agtcctagca tctcacccag
1321 ctcagtggaa aacagtgggg tcagtcagtc accactcgtg caataagaca ttttctagct
1381 acttcaaaca ttccccagta ccttcag
//