LOCUS AK292031 2450 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78457 complete cds, highly similar to Homo sapiens Usher syndrome 1C binding protein 1 (USHBP1), mRNA. ACCESSION AK292031 VERSION AK292031.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2450) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2450 /clone="SPLEN2023378" /clone_lib="SPLEN2" /db_xref="H-InvDB:HIT000424828" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="spleen" CDS 143..2254 /codon_start=1 /note="highly similar to Homo sapiens Usher syndrome 1C binding protein 1 (USHBP1), mRNA" /protein_id="BAF84720.1" /transl_table=1 /translation="MSARATRPRSRRGRHAPPGELDPVAESSEEVEAASGSSKPSFAP PPVSSGLEQLGPMEEVSGQGLGSRTDKKMDGGSGRELASAPEVPHKPAVEAHQAPEAA LQYKETVPPGNGAPDVFQTLQHTLSSLEAAAAAWRHQPPSHSGPMEFEGTSEGGAGSL GKQEGAGSCQREAARLAERNAWLRLALSSREDELVRTQASLEAIRAEKETLQKEVQEL QDSLLRLEPCPHLSRNQAGGSGSGSSSSEADREPWETQDSFSLAHPLLRRLRSHSSTQ ILGSLPNQPLSPEMHIMEAQMEQLRGSIEKLKCFNRLLSAVLQGYKGRCEGLSMQLGQ REAEATALHLALQYSEHCEEAYRVLLALREADSGAGDEAPMSDLQAAEKEAWRLLAQE EAAMDAGAQQNPQPSPEGSSVDKPTPQEVAFQLRSYVQRLQERRSLMKILSEPGPTLA PMPTVPRAEAMVQAILGTQAGPALPRLEKTQIQQDLVAAREALADLMLRLQLVRREKR GLELREAALRALGPAHVLLLEQLRWERAELQAGGANSSGGHSSGGGSSGDEEEWYQGL PAVPGGTSGIDGGQVGRAWDPEKLAQELAASLTRTLDLQEQLQSLRRELEQVAQKGRA RRSQSAELNRDLCKAHSALVLAFRGAHRKQEEQRRKLEQQMALMEAQQAEEVAVLEAT ARALGKPRPPLPPPQLGDTFL" BASE COUNT 528 a 714 c 818 g 390 t ORIGIN 1 agcccaggcc tgaacaggca gtggtcagag tgaccccaac agagtgtccc gggactcagg 61 cctctgatca agttaccccc agaggatcag agaggggttg acgaaggaga agcattcaga 121 gggcactggc ttctggacag caatgagtgc ccgggccacg cggccccgaa gccggcgagg 181 gaggcatgct ccacccggtg aactggatcc cgtggctgag agttcagagg aggtcgaggc 241 agccagtggg agctccaagc ccagctttgc cccacctccg gtgagctccg ggctggagca 301 gctgggcccc atggaggagg tcagtggcca aggcctagga agcaggactg acaagaagat 361 ggatgggggc tctggcaggg aactggcctc agcccccgaa gtgccccaca aacctgcagt 421 ggaagcccac caagccccag aagcagccct acagtacaag gagactgtgc cccctgggaa 481 tggggccccc gatgtgtttc agaccctcca gcacactctg agctccctgg aggcagcggc 541 tgcagcctgg cgccaccagc cccccagcca ttctgggccg atggagttcg aaggcacaag 601 cgaaggggga gcaggttccc ttgggaagca ggaaggggca gggagctgcc agcgagaggc 661 agctcgcctg gccgagagga atgcctggct ccggctggcc ctgagtagcc gagaggatga 721 gctggtccgc acgcaggcct ccctggaggc catccgagct gagaaggaga cgctgcagaa 781 agaggttcaa gagctgcagg attccctctt gaggctggag ccctgcccac atctttcccg 841 caaccaagca ggtggctcag gcagtggttc tagcagctct gaggcagaca gggaaccctg 901 ggagactcag gactccttct ccctggctca ccccctgctt cggcgcctcc gcagccattc 961 cagcacccag atccttgggt ctcttcccaa ccagcccctc agtcctgaga tgcacatcat 1021 ggaagcccag atggagcaac tccgggggag cattgagaag ctcaaatgct ttaatcgtct 1081 gctatcagct gtgctacagg gatacaaggg ccgctgtgaa ggcctcagca tgcagctagg 1141 ccagcgggag gctgaggcca cagcattgca tctggccttg cagtacagtg aacactgtga 1201 agaggcatac agggttctgc ttgctctgcg ggaggccgac tcaggagcag gagacgaagc 1261 ccccatgagc gacctgcaag cagctgaaaa ggaagcatgg aggctgctgg cacaagagga 1321 ggctgccatg gatgcaggag cacagcagaa tccacagcca agccctgaag gcagcagtgt 1381 ggataagccc accccacagg aagtggcttt ccagctccga agctatgtcc agcgtctcca 1441 ggagcgccgt tctctaatga agattctctc agagcctggc cccaccttgg cacccatgcc 1501 cactgtgccc cgtgcagaag ccatggtgca ggccattctg gggacccagg ctggcccagc 1561 tcttccccga ctggagaaga cacaaattca gcaggacctg gtggccgcaa gggaggccct 1621 ggcggacctg atgcttcggc tgcagctggt gcggcgtgag aagcggggcc tagagctgcg 1681 ggaggctgcc ctccgagccc tgggtccagc tcacgtgctc ctgctggagc agctgcggtg 1741 ggaacgggca gagctccagg ctggtggggc aaacagcagt ggcggacata gcagcggagg 1801 tggcagcagc ggggacgagg aagagtggta tcagggcctt cctgctgtcc ctggtggcac 1861 cagtggcatt gatggtggcc aggtgggcag agcctgggac ccagagaagt tagcccagga 1921 actggcagca tcgctcacca ggacactgga cctgcaggag cagctgcagt ctctgcgcag 1981 ggagctggaa caggtggctc agaaggggcg agccagacgg tctcagagtg ccgagctgaa 2041 cagggattta tgcaaagccc acagcgccct ggtcctggcc ttccgaggag cccaccggaa 2101 gcaggaagag caacgccgga agttggagca gcagatggca ctcatggagg ctcagcaggc 2161 cgaggaggtg gcggtgctcg aagccactgc aagggccctg gggaagccca ggcctcccct 2221 cccgcctccc cagcttgggg acacctttct gtaggcccct tacccagcca tgtctggaca 2281 tgccagacag ctgtggcatg tcataaactg tcctggagtg acatcatgtc atgttgcatg 2341 atttggcatg ttggggcaca tttggcgtga gggaagctgg tgcacatggg tgtccagggc 2401 ctgatggggt gtggccaggc aatgaagaaa gactcaggtg tctttggcct //