LOCUS AK292021 2382 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75850 complete cds, highly similar to Homo
sapiens cyclic nucleotide gated channel alpha 1 (CNGA1), mRNA.
ACCESSION AK292021
VERSION AK292021.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2382)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2382
/clone="SPLEN2017548"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000424818"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 267..2339
/codon_start=1
/note="highly similar to Homo sapiens cyclic nucleotide
gated channel alpha 1 (CNGA1), mRNA"
/protein_id="BAF84710.1"
/transl_table=1
/translation="MKLSMKNNIINTQQSFVTMPNVIVPDIEKEIRRMVNGACSSFSE
DDDSASTSEESENENPHARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEP
EEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVIDP
SGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDVVYLIDMFVR
TRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLL
RFSRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVY
PDINDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATI
VGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDE
KEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICK
KGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIK
SIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQILMKDGLLDLNIANAGSDPKDLE
EKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPLIDTEFSSIEGPGA
ESGPIDST"
BASE COUNT 788 a 440 c 525 g 629 t
ORIGIN
1 tttttcctgc ttcttgaatg gtagagagca gtctatagcc agagactcgt ccctagctcg
61 agctgagctt tcgcttgccg tccaccactg cccaccactg tcgtttgctg ccatcgcaga
121 cctgctgctg acttccatcc ctctggatcc ggcaagggcc tggattttga caatgtcaag
181 atttaccgta tatccctgtt tgtttggata caccagtgac gtccacttct agaagacaaa
241 gttatattac ttaaacaacc aaagatatga aactatccat gaagaacaat attatcaata
301 cacagcagtc ttttgtaacc atgcccaatg tgattgtacc agatattgaa aaggaaatac
361 gaaggatggt aaatggagca tgcagctcct tttctgagga tgatgacagt gcctctacat
421 ctgaagaatc agagaatgaa aaccctcatg caaggggttc ctttagttat aagtcactca
481 gaaagggagg accatcacag agggagcagt acctgcctgg tgccattgca ctttttaatg
541 tgaacaacag cagcaataag gaccaggaac cagaagaaaa aaagaaaaag aaaaaagaaa
601 agaagagcaa gtcagatgat aaaaacgaaa ataaaaacga cccagagaag aaaaagaaga
661 aaaaggacaa agagaagaaa aagaaagagg agaaaagcaa agataagaaa gaagaggaga
721 agaaagaagt tgtggttatt gatccctcgg gaaacacata ttacaactgg ctgttttgca
781 tcacattacc tgttatgtac aactggacaa tggttattgc cagagcatgt tttgatgaac
841 ttcaatctga ttacctagaa tattggctca ttttggatta cgtatcagac gtagtctatt
901 taatcgatat gtttgtacga acaaggacag gttacctaga acaaggactg ctggtaaagg
961 aagaacttaa actcataaat aaatataaat ccaacttgca atttaaactt gatgttctgt
1021 cactgatacc aactgatttg ctgtatttta agttagggtg gaactatcca gaaattagat
1081 taaacaggtt gttacggttc tctcgtatgt ttgagttctt ccagagaaca gaaacaagga
1141 caaactatcc aaacatcttc aggatttcca accttgttat gtatatcgtc atcattatcc
1201 actggaatgc atgtgtgttc tactctattt ctaaagctat tggatttgga aatgatacat
1261 gggtctaccc tgatattaat gatcctgaat ttggccgttt ggctagaaaa tacgtataca
1321 gcctttactg gtctacactg actttgacta ccattggtga aacaccccct cccgtgaggg
1381 attctgagta tgtctttgtg gtggttgatt tcctaattgg agtgttaatt tttgctacca
1441 tcgttggtaa cataggttct atgatttcca acatgaatgc agccagagca gaatttcaag
1501 caagaattga tgctatcaag caatatatgc attttcgaaa tgtaagcaaa gatatggaaa
1561 agagggttat taaatggttt gactacctgt ggaccaacaa aaaaacagtt gatgagaaag
1621 aagtcttaaa gtatctacct gataaactaa gagcagaaat tgccatcaac gttcacttag
1681 acacattaaa aaaggtacgc atttttgctg attgtgaagc tggtctgttg gtggagttgg
1741 tcttgaaatt gcaaccccaa gtctacagtc ctggagatta tatttgcaag aaaggggata
1801 tcggacgaga gatgtacatt atcaaggaag gcaaactcgc tgtggtggca gatgatggag
1861 tcactcagtt tgtggtattg agcgatggca gctacttcgg tgagatcagc attcttaaca
1921 ttaaagggag caaagctggc aatcgaagaa cggccaatat taaaagtatt ggctactcag
1981 acctgttctg tctctcaaaa gatgacctca tggaagctct aactgagtac ccagatgcca
2041 aaactatgct ggaagagaaa gggaagcaga ttttaatgaa agatggtcta ctggatctaa
2101 acattgcaaa tgctggcagt gatcctaaag atcttgaaga gaaggttact cgaatggagg
2161 ggtcagtaga cctcctgcaa accaggtttg cccgaatctt ggctgagtat gagtccatgc
2221 agcagaaact gaaacaaaga ttaaccaagg ttgagaaatt tctgaaaccg cttattgaca
2281 cagaattttc aagtattgag ggacctggag cggaaagtgg gcccatcgac tctacataga
2341 accgaaaagc tggtcattaa cagggacatg cctcatgatc ct
//