LOCUS AK291994 1994 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75889 complete cds, highly similar to Homo
sapiens syntrophin, alpha 1 (dystrophin-associated protein A1,
59kDa, acidic component) (SNTA1), mRNA.
ACCESSION AK291994
VERSION AK291994.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1994)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1994
/clone="SMINT2014119"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000424791"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 144..1661
/codon_start=1
/note="highly similar to Homo sapiens syntrophin, alpha 1
(dystrophin-associated protein A1, 59kDa, acidic
component) (SNTA1), mRNA"
/protein_id="BAF84683.1"
/transl_table=1
/translation="MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSP
ADGDPGPEPGAPREQEPAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISI
KGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGK
EVVLEVKYMKDVSPYFKNSTGGTSVGWDSPPASPLQRQPSSPGPTPRNFSEAKHMSLK
MAYVSKRCTPNDPEPRYLEICSADGQDTLFLRAKDEASARSWATAIQAQVNTLTPRVK
DELQALLAATSTAGSQDIKQIGWLTEQLPSGGTAPTLALLTEKELLLYLSLPETREAL
SRPARTAPLIATRLVHSGPSKGSVPYDAELSFALRTGTRHGVDTHLFSVESPQELAAW
TRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAVLLRQPF
EKLQMSSDDGASLLFLDFGGAEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGLLA"
BASE COUNT 356 a 640 c 656 g 342 t
ORIGIN
1 agagctcctc ccccagcggc cggggtaggg tggcggctgg cccagccggg cccccgctgc
61 cctctgccct gggcgcttgg tcggagcggg ctgggcaaag cgggacaggg cgagcgcggc
121 ggcccggggg ctcggaggcg aagatggcgt ccggcaggcg cgccccgcgc accgggctgc
181 tggagctgcg cgccggggcg ggctcggggg ccggcggcga gcgatggcag cgggtgctgc
241 tgagtctggc ggaggacgtg ctgaccgtga gccccgccga cggcgaccct ggtcccgagc
301 ccggcgctcc gcgggagcag gagcccgcgc agctcaacgg cgccgcggag ccgggcgccg
361 ggcccccgca gctgccagag gcgctactgc tccagcggcg ccgcgtgacg gtgcgcaagg
421 ccgacgccgg tgggctgggc atcagcatca aaggcggccg ggagaacaag atgcctattc
481 tcatttccaa gatcttcaag ggattggcag ctgaccagac agaggccctt tttgtggggg
541 atgccatcct gtctgtgaat ggggaagact tgtcctctgc tacccatgat gaggcggtgc
601 aggtcctcaa gaagacaggc aaggaggtgg tgctggaggt caagtatatg aaggacgtct
661 caccgtattt caagaactct actggtggga cctcggtcgg ctgggactca cctcctgcct
721 caccccttca gcggcagcct tcctcccctg gccccacacc ccggaacttc agcgaggcca
781 aacacatgtc cttgaagatg gcatatgtct cgaagaggtg cacccccaat gacccggagc
841 ccaggtatct ggagatctgc tcggcagatg gtcaagacac cctcttcctg agggccaagg
901 atgaggctag tgcgaggtcg tgggcgactg ccatccaagc ccaggtcaat actctgacgc
961 cgcgggtcaa ggatgagctg caggcactgt tggcagccac cagcacagct gggagccagg
1021 acatcaagca gattggctgg ctaactgagc agctgcccag tgggggcaca gcccccaccc
1081 tggccctgct aactgaaaag gaactgctcc tctacttgtc tctccccgag acccgcgagg
1141 ccctgagccg gccagcccgt actgccccac tcatcgccac cagactggtg cactcaggcc
1201 cctccaaggg ctcagtgccc tacgatgcag agctctcttt tgccctgcgc acgggcacgc
1261 gtcacggtgt ggacactcac ctgttcagcg tggagtcacc gcaggagctg gctgcctgga
1321 cccgccagct tgtggatggc tgtcaccggg ccgccgaggg tgtgcaggag gtgtctacag
1381 cctgcacgtg gaatgggcgt ccctgcagcc tgtctgtgca catcgacaag ggcttcacac
1441 tgtgggcggc tgagccaggt gcagcccgag ctgtgctcct gcgacagccc ttcgagaagc
1501 tgcagatgtc ttcagatgac ggtgccagtc tccttttcct ggattttgga ggtgctgaag
1561 gcgagatcca gctggacctg cactcgtgtc ccaaaaccat agtcttcatc atccactcct
1621 tcctgtcggc caaagtcacc cgcctcgggc tgttggccta gaagtcgccg gatgcactag
1681 ccctgaagag gggtgtccat gacatggcct gagctgggcc tccaccgact gcctgctcac
1741 ccctgggctg agggaaggga gaggagagga acaagggcct ccgaaacccc aaccctgagg
1801 gagactggat tggtcttggg gcccaggacc cagacgcagg acagagtgga ctctgcctgt
1861 gatggggtgg ccttcctgct gcccccctcc accagtgcct tttgcagaga gatattttgt
1921 gtacacagaa gccattccga gtctgggacc tgcccctgtg cggatcctga ccccagccaa
1981 cagctgagct gccg
//