LOCUS AK291959 899 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77165 complete cds, highly similar to Homo
sapiens vasoactive intestinal peptide (VIP), transcript variant 2,
mRNA.
ACCESSION AK291959
VERSION AK291959.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 899)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..899
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH2002524"
/clone_lib="SKNSH2"
/db_xref="H-InvDB:HIT000424756"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 126..632
/codon_start=1
/note="highly similar to Homo sapiens vasoactive
intestinal peptide (VIP), transcript variant 2, mRNA"
/protein_id="BAF84648.1"
/transl_table=1
/translation="MDTRNKAQLLVLLTLLSVLFSQTSAWPLYRAPSALRLGDRIPFE
GANEPDQVSLKEDIDMSQNALAENDTPYYDVSRNARHADGVFTSDFSKLLGQLSAKKY
LESLMGKRVSNISEDPVPVKRHSDAVFTDNYTRLRKQMAVKKYLNSILNGKRSEGESP
DFPEELEK"
BASE COUNT 296 a 185 c 182 g 236 t
ORIGIN
1 attgctaagg gcagagaact ggtggagcct ttctcttact cccaggactt cagcacctaa
61 gacagctcca aaacaaacca gaacagtcag ctccggggga gcacgactgg gcgagaggca
121 cagaaatgga caccagaaat aaggcccagc tccttgtgct cctgactctt ctcagtgtgc
181 tcttctcaca gacttcggca tggcctcttt acagggcacc ttctgctctc aggttgggtg
241 acagaatacc ctttgaggga gcaaatgaac ctgatcaagt ttcattaaaa gaagacattg
301 acatgtcgca aaatgcatta gctgaaaatg acacacccta ttatgatgta tccagaaatg
361 ccaggcatgc tgatggagtt ttcaccagtg acttcagtaa actcttgggt caactttctg
421 ccaaaaagta ccttgagtct cttatgggaa aacgtgttag taacatctca gaagaccctg
481 taccagtcaa acgtcactca gatgcagtct tcactgacaa ctatacccgc cttagaaaac
541 aaatggctgt aaagaaatat ttgaactcaa ttctgaatgg aaagaggagt gagggagaat
601 ctcccgactt tccagaagag ttagaaaaat gatgaaaaag acctttggag caaagctgat
661 gacaacttcc cagtgaattc ttgaaggaaa acgatacgca acataattaa attttgagtt
721 ctacataagt aattcaagaa aacaacttca atatccaaac caaataaaaa tattgtgttg
781 tgaatgttgt gatgtattct agctaatgta ataactgtga agtttacatt gtaaatagta
841 tttgagagtt ctaaattttg tctttaactc ataaaaagcc tgcaatttca tatgctgta
//