LOCUS AK291953 1052 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77164 complete cds, highly similar to Homo
sapiens DnaJ (Hsp40) homolog, subfamily B, member 6 (DNAJB6),
transcript variant 2, mRNA.
ACCESSION AK291953
VERSION AK291953.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1052)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1052
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH1000051"
/clone_lib="SKNSH1"
/db_xref="H-InvDB:HIT000424750"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 138..863
/codon_start=1
/note="highly similar to Homo sapiens DnaJ (Hsp40)
homolog, subfamily B, member 6 (DNAJB6), transcript
variant 2, mRNA"
/protein_id="BAF84642.1"
/transl_table=1
/translation="MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAER
KFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFRE
FFGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTG
FTSFGSLGHGGLTSFSSTSFGGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEV
EEDGQLKSLTINGKEQLLRLDNK"
BASE COUNT 311 a 212 c 257 g 272 t
ORIGIN
1 aaagcgcgag gagccgccgc caccaccagc gcagcagtcc tggagctgtg aggagattcg
61 ggccgtcacc ctgcctcccc tgcgtcccgc caccggccgc ttctgtcctc ggacccattc
121 caacaatctc gtaaaacatg gtggattact atgaagttct aggcgtgcag agacatgcct
181 cacccgagga tattaaaaag gcatatcgga aactggcact gaagtggcat ccagataaaa
241 atcctgagaa taaagaagaa gcagagagaa aattcaagca agtagcggag gcatatgaag
301 tgctgtcgga tgctaagaaa cgggacatct atgacaaata tggcaaagaa ggattaaatg
361 gtggaggagg aggtggaagt cattttgaca gtccatttga atttggcttc acattccgta
421 acccagatga tgtcttcagg gaattttttg gtggaaggga cccattttca tttgacttct
481 ttgaagaccc ttttgaggac ttctttggga atcgaagggg tccccgagga agcagaagcc
541 gagggacggg gtcgtttttc tctgcgttca gtggatttcc gtcttttgga agtggatttt
601 cttcttttga tacaggattt acttcatttg ggtcactagg tcacgggggc ctcacttcat
661 tctcttccac gtcatttggt ggtagtggca tgggcaactt caaatcgata tcaacttcaa
721 ctaaaatggt taatggcaga aaaatcacta caaagagaat tgtcgagaac ggtcaagaaa
781 gagtagaagt tgaagaagat ggccagttaa agtccttaac aataaatggt aaggagcagc
841 tgctgcgctt ggataacaag taattcaacg cacgcactta acagaaatgt taaactataa
901 caagcaccat ttgaggatta acaggaacat ttttttgaag atttcaaacg aactcgactt
961 tcagtataat tgtacctaaa gtatttataa acagctcatc ggagcctcta tttgtcatag
1021 acttttgagt tgattgttgg gaccacataa ta
//