LOCUS AK291925 2500 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78507 complete cds.
ACCESSION AK291925
VERSION AK291925.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2500)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2500
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2003180"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000424722"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 730..2442
/codon_start=1
/protein_id="BAF84614.1"
/transl_table=1
/translation="MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLK
QLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNL
IENVQRLGLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTS
KPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGI
LIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQL
LNLGRQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIG
SLGSICPNSYGSVKDVCTAKFGSKHFFHLIPNEATICSLLLCNRNDTAWDELKLTCQT
ALHVLQLTLKEPWALLGGGCTETHLAAYIRHKTHNDPESILKDDECTQTELQLIAEAF
CSALESVVGSLEHDGGEILTDMKYGHLWSVQADSPCVANWPDLLSQCGCGLYNSQEEL
NWSFLRSTRRPFVPQSCLPHEAVGSASNLTLDCLTAKLSGLQVAVETANLILDLSYVI
EDKN"
BASE COUNT 736 a 500 c 545 g 719 t
ORIGIN
1 gcggcagcag cggctgcttg agatctgttt ctggggcctc tggcggtggc ggcctggggc
61 ggcgcgacgg ctggtgcgca ggtacactga tgctgaagta ctatgagcct tcggaacttg
121 tggagagact acaaagtttt ggttgttatg gtccctttag ttgggctcat acatttgggg
181 tggtacagaa tcaaaagcag ccctgttttc caaataccta aaaacgacga cattcctgag
241 caagatagtc tgggactttc aaatcttcag aagagccaaa tccaggggaa gtagcaggct
301 tgcaatcttc aggtaaagaa gcagctttga atctgagctt catatcgaaa gaagagatga
361 aaaataccag ttggattaga aagaactggc ttcttgtagc tgggatatct ttcataggtg
421 tccatcttgg aacatacttt ttgcagaggt ctgcaaagca gtctgtaaaa tttcagtctc
481 aaagcaaaca aaagagtatt gaagagtgaa gtaaaataaa tatttggaat tactaatttg
541 tcattaaatc attctatgct gattagcttc ataaacattg aactttttga ttttatagcc
601 acaatgctgc atattcatac tttaattcct aaagaataat ttttaatgtt aaaacgtgat
661 aatgcaataa atagaaaaat gtggtttaca aaataaaaac ggtcttcact agttaccacc
721 tgaagtaaga tgtctcgttt ggaagctaag aagccatcat tgtgtaagag tgaaccactg
781 acaactgaga gagtcaggac cacactttct gtcttgaaaa gaattgtaac atcatgctat
841 ggcccctcag gtaggctgaa gcagctgcac aatggctttg gaggttacgt gtgtacaacc
901 tcacagtcct cagctctgct cagtcacctt ttggtcacac atcccatttt aaagatcctg
961 acagcctcca tacagaatca tgtgtcaagc ttcagtgatt gtggcttatt cacagctatt
1021 ctttgctgca acctgattga aaatgttcag agattaggct tgacacccac cactgtcatt
1081 agattaaata aacatctttt gagtctttgc atcagttatc tcaagtctga gacctgtggt
1141 tgtcgaatcc cagtggactt tagtagtact cagatcctcc tttgtttggt gcgtagtata
1201 ttaacaagta aacctgcctg tatgctcacc agaaaggaaa cagagcatgt cagtgctttg
1261 atcctgagag cctttttgct tacaattcca gaaaatgctg aaggccacat cattttagga
1321 aagagtttaa ttgtaccttt aaaaggtcaa agagttatag attccactgt attacctggg
1381 atactcattg aaatgtcaga agttcaatta atgaggctat tacctatcaa aaaatcaact
1441 gccctcaagg tggcactctt ttgtacaact ttatccggag acacttctga cactggagaa
1501 ggaactgtgg tggtcagtta tggggtttct cttgaaaatg cagtcttgga ccagctgctt
1561 aacctaggaa ggcagctaat cagtgaccac gtagatcttg tcctgtgcca aaaagttata
1621 catccatctt tgaagcagtt tctcaatatg catcgtatta ttgccataga cagaattgga
1681 gtgactctga tggaacccct gactaaaatg acaggaacac agcctattgg atccctaggc
1741 tcaatatgtc ctaatagtta tggaagtgtg aaagatgtgt gcactgcaaa atttggctcc
1801 aaacattttt ttcatcttat tcctaatgaa gcaacaatct gcagcttgct tctctgcaac
1861 agaaatgaca ctgcctggga tgagctgaag ctcacgtgtc agacggcact gcatgtcctg
1921 cagttaacac tcaaggaacc atgggctttg ttgggaggtg gctgtactga aactcatttg
1981 gctgcatata tcagacacaa gactcacaac gacccagaaa gcattctcaa agatgatgaa
2041 tgtactcaaa cagaacttca attaattgct gaagcatttt gcagtgccct agaatctgtt
2101 gttggctctt tagaacatga tggaggtgaa attctcactg acatgaagta tggacacctt
2161 tggtcagttc aggcagattc tccctgtgtt gctaactggc cagatttgct ttcacagtgt
2221 ggctgtggat tatacaatag ccaggaagaa ctcaactggt ctttcttaag aagcacacgt
2281 cgtccatttg tgccacaaag ctgccttcca catgaagctg tgggctcagc cagcaacctg
2341 accttggact gtttgactgc aaagcttagt ggcctacagg tggctgtaga gacagccaat
2401 ttgattttgg atctttcata tgttattgaa gataaaaact aagagaatag catgttcgta
2461 ttacaagaga aacaaataaa ctagtctgtt ggcaattgag
//