LOCUS AK291924 2529 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75470 complete cds.
ACCESSION AK291924
VERSION AK291924.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2529)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2529
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2003110"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000424721"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 236..2176
/codon_start=1
/protein_id="BAF84613.1"
/transl_table=1
/translation="MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRP
VSSRPQETVQAQSSRLLLLHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLR
PVSTSSSWIGNQRRVTVTEVLRETARPQSSALHPLLTFESQQQQVGGFEGPEQDEFDK
VLASMELEEPGMELECGVSSEAIPILPAQQREGSVLAKKARVVDLSGSCQKGPVPAIH
KAGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQ
ALQPLQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGL
FPRIPLQPQAPVSSIGSPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTR
AKTRRFPGPAGILPHQQSGRSLEDIMVSAPQTPTHGALAKFQTEIVASSQASVEEDFG
RGPWLTMKSTLGLDERDPSCFLCTYSIVMVLRKAALKQLPRNKVPNMAVMIKSLTRST
MDASVVFKDPTGEMQGTVHRLLLETCQNELKPGSVLLLKQIGVFSPSLRNHYLNVTPN
NLVHIYSPDSGDGSFLKPSQPFPKDSGSFQHDVAAKPEEGFRTAQNLEAEASPEEELP
EADDLDGLLSELPEDFFCGTSS"
BASE COUNT 537 a 775 c 674 g 543 t
ORIGIN
1 tttaagaagg cggagacgcc ccagtggcgg cgtcttcgaa tgcggcctaa ggcgcctgcc
61 gccagtctcc tggcgacttt ccctatatcg cagagactca tccctctgac cccagcccgg
121 aagcactgtc cctcggagtc cgagacttcc acctgggtcg tgtccaaggc cccggcgact
181 ccccggactc ggggtgccgg gccaacctcc ccgccgaggc ccacccgccg tcgctatggc
241 gtgcagtttg cagaagctgt ttgctgtgga agaggagttt gaagatgagg atttcttgtc
301 tgctgtggag gatgcagaga accggtttac tggctcactg cctgtgaatg ctgggcgcct
361 gagacctgtc tcttctaggc cacaggagac tgtgcaggca cagtcctcca ggctgctgct
421 gttacacccc actgctccct cagaggcttt gggcctgcca gacttggacc tctgcctccc
481 tgcctccagc acgcccagtg ctgacagccg tccatcatgc ataggagcag ctcccctaag
541 gcctgtctct acttccagca gctggattgg caatcagaga agagtgacag tgacagaagt
601 gctcagagag acagcaagac ctcagtcctc agccttacac cccctactca cctttgagag
661 ccaacagcag caagttggtg gctttgaggg gcctgaacaa gacgaatttg ataaagtcct
721 ggcaagcatg gagttggagg agcctggcat ggagctggaa tgtggagtca gcagtgaggc
781 cataccaatc ctgcctgccc agcagcggga gggttcagta ttggctaaaa aagcccgggt
841 agttgatctg agtggatctt gccagaaggg gcctgtgcct gccatccaca aagcgggtat
901 catgtccgcc caggatgagt ctctagatcc tgtcatccaa tgtaggactc cacgaccccc
961 cttgagacct ggtgctgtgg gtcaccttcc tgttccaact gccttaacag ttcccactca
1021 gcaactccac tgggaagtct gtccgcaacg ctcccctgtt caagcacttc agcctctcca
1081 agctgctaga gggaccattc agagcagccc tcaaaatcgt ttcccttgtc agccattcca
1141 gtctccaagt tcctggttaa gtggcaaagc tcatttaccc agacctcgaa ctcccaactc
1201 aagctgttct actccctcaa ggactagctc tggattattt cctcggatac ccttacaacc
1261 gcaagctcca gtgtcttcca ttgggtctcc tgttggtacc ccaaaaggtc cccagggagc
1321 tctgcagaca cccatagtca ccaaccacct ggtgcagcta gtcactgctg ccagccggac
1381 accccagcag cccacccatc cctccacccg agccaaaact cgccgtttcc ctggcccagc
1441 tgggatcctg cctcaccagc agagtgggag aagtctggag gacatcatgg tttccgcgcc
1501 ccaaactcca acccatggtg ctctggctaa attccagaca gagattgttg ctagttccca
1561 ggcatctgtg gaggaggatt ttgggcgagg gccctggctg accatgaaat ccacgctagg
1621 cctggatgag agagacccta gctgcttcct ctgtacctac agcattgtca tggtgctgcg
1681 caaggcagcc ctgaagcagc ttcctaggaa caaggtcccc aacatggcgg tgatgatcaa
1741 gtccctgact cggagcacaa tggacgccag tgtggttttc aaggacccca cgggagagat
1801 gcaggggacg gtgcacaggt tgctgctgga gacgtgccag aatgagctga agcctggctc
1861 agtgctgctg ctgaagcaga ttggagtgtt ttctccttca cttcgaaatc actacctcaa
1921 cgtgacaccc aacaacctgg tccatattta cagcccggat tctggggatg ggagcttcct
1981 caagccatct cagcccttcc ccaaggattc agggagcttc cagcatgatg tggctgcaaa
2041 gcccgaggaa ggcttcagaa cagcacagaa cctagaggca gaggcgtccc ctgaggaaga
2101 actcccagaa gcagatgacc tggatggact cctgagtgag cttcctgaag acttcttctg
2161 tgggaccagt agttgagact gccccaacgc aggacaaccc accatgagca ggcagctctg
2221 ggcatgtgtc tggtcacatc caagggggag aagaaggcca gcatgattgg agagtggaca
2281 cagccggggg gcttctgtgg ttgctcccac cctgggtgtt ttccctgaga gccccctcat
2341 ctctgcgctg ccctcacttt gggccttcct ttgccgttgg caccagaatc cggccggaga
2401 ctggctctcc agccaacaag aaaggcctgt caccctcgcc ttgggtgtcc ctctcctgcc
2461 tcagcttaat tttagaggat attgggcctg gttttcttgt cccttcatac cctagtccct
2521 ggacagctg
//