LOCUS AK291788 3336 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78679 complete cds, highly similar to Homo
sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (DDX46), mRNA.
ACCESSION AK291788
VERSION AK291788.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3336)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3336
/clone="PLACE7017782"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424585"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 159..3257
/codon_start=1
/note="highly similar to Homo sapiens DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (DDX46), mRNA"
/protein_id="BAF84477.1"
/transl_table=1
/translation="MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRD
RDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRS
RSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEM
RKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGN
EMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVD
SDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN
FYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGY
EKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVI
MTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMID
MLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRA
MEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVII
FVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG
LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALEL
SGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDETEQALANERKKLQKAA
LGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAPTAGNAEKLEIAKRLA
LRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQLAEKINAKLNYVPL
EKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTPKEALQRISEYSEAAITIRGT
YFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYK
VL"
BASE COUNT 1106 a 570 c 893 g 767 t
ORIGIN
1 gttttcgttg gccgcgctgg gatggccgcc acagctgtag gtgctgctag tgtttagcgc
61 tggtctttgc cgggcgttga gggcagctca gcctccttgt ttgtccggtt cgcctgtgcg
121 tggtactcaa gggcaccagt attcccgcgg tcggcagcat gggtcgggag tcacgccact
181 atcgaaaacg atcggcatcc cggggtcgct ctggaagtcg gtctagaagt cgctcaccct
241 cagacaaaag aagtaaacgt ggagatgaca gacggtctag aagtagagat agagatagga
301 ggagagagag gtctcgtagc agggataaaa gaagatctcg gtcaagggac aggaagcgtc
361 tgagacgttc cagaagtaga gagagagaca gaagccgaga gcgaagaaga tctcgaagta
421 gagacaggag acgctcaagg agtagaagcc ggggccggcg atcccgatcc tccagtcctg
481 gaaataaaag caagaaaact gagaatagat ctaggtccaa agagaaaact gatggtgggg
541 aaagttctaa agagaagaaa aaagacaaag atgacaagga ggatgaaaaa gaaaaagatg
601 ctggcaactt tgaccagaat aagctggaag aagaaatgag aaagcgaaaa gaaagagtag
661 aaaaatggcg agaagagcaa cgtaaaaagg ctatggaaaa cataggagaa ctgaaaaagg
721 aaatcgaaga gatgaaacaa gggaaaaagt ggagtttaga ggacgatgat gatgacgaag
781 atgatcctgc agaagctgaa aaggagggaa atgaaatgga gggtgaggag ttagatccat
841 tagatgctta catggaagaa gtgaaagagg aagtaaaaaa atttaacatg agaagtgtaa
901 aaggtggtgg gggaaatgaa aagaagtctg ggccaacggt cacaaaagtt gtcactgttg
961 tgacaaccaa aaaagcagtt gtggattctg ataagaagaa aggtgagctg atggagaatg
1021 accaggatgc catggagtat tcttcagagg aggaagaagt tgatcttcag acagccctta
1081 cagggtatca aacaaaacag cgaaagcttc tagaaccagt tgatcatgga aaaattgagt
1141 atgagccatt taggaaaaac ttctatgttg aagttccaga actagcaaaa atgtctcaag
1201 aagaggtaaa tgtgtttcga ttggaaatgg agggcattac agttaaagga aaaggttgcc
1261 ccaaaccaat taaatcctgg gtccagtgtg gaatttccat gaagatctta aattccctca
1321 agaagcatgg ctatgaaaag cccacgccca tccaaaccca agctattcct gctataatgt
1381 ctggacgaga tttgattggc attgccaaaa caggaagtgg aaagaccatt gcttttctgt
1441 tgcccatgtt tagacacatc atggatcaga ggtcattaga ggaaggagag gggccaatag
1501 ctgtcatcat gactccaact cgagaactgg ctttacagat tactaaagag tgtaagaagt
1561 tttccaagac tttgggactt agagtggtct gtgtttacgg aggaacagga atcagtgagc
1621 agattgctga gctgaaaaga ggtgctgaaa ttattgtttg cacacctggt cgaatgattg
1681 acatgttagc cgctaacagt ggtcgggtca caaatcttcg aagagtgaca tatgttgttt
1741 tagatgaagc agacagaatg tttgacatgg gttttgaacc ccaggtcatg cgcatcgtgg
1801 ataatgttcg tcctgatcga cagacggtta tgttttcagc tactttcccc agagctatgg
1861 aggctttggc tcgcaggatc ctcagtaaac ctattgaagt acaagttgga ggcaggagtg
1921 tggtttgctc agatgtggag caacaagtga ttgtgattga agaagaaaag aaattcttga
1981 agttacttga gcttctaggc cattatcaag agtcaggatc tgtcattata tttgtggata
2041 agcaggaaca tgctgatggt cttcttaagg atttaatgag agcatcttat ccttgcatgt
2101 ctcttcatgg aggcattgat caatatgaca gagatagcat cataaatgac tttaagaatg
2161 ggacctgcaa acttcttgtg gctacctctg ttgctgcccg aggtctagat gtgaaacatc
2221 tgattcttgt agtaaattat agctgcccca accattatga ggattatgta cacagagcag
2281 ggcggactgg aagagcagga aacaagggtt atgcttatac ttttatcaca gaggatcaag
2341 ctcgctatgc tggtgacata attaaagctc ttgaattgtc agggactgca gtacctcctg
2401 atttagagaa actgtggagt gatttcaaag atcagcagaa agctgagggg aaaataatta
2461 aaaagagtag tgggttctct ggtaagggat tcaagtttga tgaaacagaa caagctttgg
2521 ctaatgagag gaagaagtta caaaaagcag ctcttggtct acaagattca gatgatgagg
2581 atgctgcagt tgatattgat gagcaaattg aaagcatgtt taattcaaag aagagagtaa
2641 aggatatggc tgctcctgga acatcaagtg ttcccgctcc aactgcagga aatgctgaga
2701 aattagaaat tgctaagaga ttggctctta gaatcaatgc ccagaagaat ttgggcatcg
2761 agtctcaggt agatgtgatg cagcaggcca ccaatgcaat tcttaggggt ggcaccattc
2821 tggctcccac tgtttctgca aaaaccattg cagaacaact tgctgaaaag atcaatgcca
2881 agctcaatta tgtgccgtta gagaaacaag aagaagagag acaggatggt ggacagaatg
2941 aatcttttaa gagatatgaa gaagaattag agatcaatga cttcccacag actgctaggt
3001 ggaaagttac ccctaaggaa gctctgcaga gaatcagtga atactctgaa gccgcaatta
3061 caatcagagg aacctacttc cctcctggca aagaacccaa ggaaggcgag cggaagattt
3121 acttggcaat tgaaagtgcc aatgaactgg ctgtgcagaa agcaaaggca gaaatcacca
3181 ggctcataaa agaagagctg atccggctgc aaaattcata ccaaccaaca aataaaggaa
3241 gatacaaagt cttatagaca tccgaaaaaa agatttttac ctgtgctggt ctatgatgta
3301 tgtggcagtt gctgtctgca gtttacaatg tattgt
//