LOCUS AK291748 3144 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78674 complete cds, highly similar to Homo
sapiens mRNA for desmocollin type 4.
ACCESSION AK291748
VERSION AK291748.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3144)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3144
/clone="PLACE7013831"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424545"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 82..2772
/codon_start=1
/note="highly similar to Homo sapiens mRNA for
desmocollin type 4"
/protein_id="BAF84437.1"
/transl_table=1
/translation="MAAAGPRRSVRGAVCLHLLLTLVIFSRAGEACKKVILNVPSKLE
ADKIIGRVNLEECFRSADLIRSSDPDFRVLNDGTVYTARAVALSDKKRSFTIWLSDKK
KQTQKEVTVLLEHQKKVSKTRHTRETVLRRAKRRWAPIPCSMQENSLGPFPLFLQQVE
SDAAQNYTVFYSISGRGVDKEPLNLFYIERDTGNLFCTRPVDREEYDVFDLIAYASTA
DGYSADLPHPLPIRVEDENDNHPVFTEAIYNFEVLESSRPGTTVGVVCATDRDEPDTM
HTRLKYSILQQTPRSPGLFSVHPSTGVITTVSHYLDREVVDKYSLIMKVQDMDGQFFG
LIGTSTCIITVTDSNDNAPTFRQNAYEAFVEENAFNVEILRIPIEDKDLINTANWRVN
FTILKGNENGHFKISTDKETNEGVLSVVKPLNYEENRQVNLEIGVNNEAPFARDIPRV
TALNRALVTVHVRDLDEGPECTPAAQYVRIKENLAVGSKINGYKAYDPENRNGNGLRY
KKLHDPKGWITIDEISGSIITSKILDREVETPKNELYNITVLAIDKDDRSCTGTLAVN
IEDVNDNPPEILQEYVVICKPKMGYTDILAVDPDEPVHGAPFYFSLPNTSPEISRLWS
LTKVNDTAARLSYQKNAGFQEYTIPITVKDRAGQAATKLLRVNLCECTHPTQCRATSR
STGVILGKWAILAILLGIALLFSVLLTLVCGVFGATKGKRFPEDLAQQNLIISNTEAP
GDDRVCSANGFMTQTTNNSSQGFCGTMGSGMKNGGQETIEMMKGGNQTLESCRGAGHH
HTLDSCRGGHTEVDNCRYTYSEWHSFTQPRLGEKLHRCNQNEDRMPSQDYVLTYNYEG
RGSPAGSVGCCSEKQEEDGLDFLNNLEPKFITLAEACTKR"
BASE COUNT 989 a 623 c 682 g 850 t
ORIGIN
1 tcccgcgccc tgcacctcgg caggtctcgc tctcggcacc ctcccggcgc ccgcgttctc
61 ctggccctgc ccggcatccc gatggccgcc gctgggcccc ggcgctccgt gcgcggagcc
121 gtctgcctgc atctgctgct gaccctcgtg atcttcagtc gtgctggtga agcctgcaaa
181 aaggtgatac ttaatgtacc ttctaaacta gaggcagaca aaataattgg cagagttaat
241 ttggaagagt gcttcaggtc tgcagacctc atccggtcaa gtgatcctga tttcagagtt
301 ctaaatgatg ggacagtgta cacagccagg gctgttgcgc tgtctgataa gaaaagatca
361 tttaccatat ggctttctga caaaaagaaa cagacacaga aagaggttac tgtgctgcta
421 gaacatcaga agaaggtatc gaagacaaga cacactagag aaactgttct caggcgtgcc
481 aagaggagat gggcacctat tccttgctct atgcaagaga attccttggg ccctttccca
541 ttgtttcttc aacaagttga atctgatgca gcacagaact atactgtctt ctactcaata
601 agtggacgtg gagttgataa agaaccttta aatttgtttt atatagaaag agacactgga
661 aatctatttt gcactcggcc tgtggatcgt gaagaatatg atgtttttga tttgattgct
721 tatgcgtcaa ctgcagatgg atattcagca gatctgcccc acccactacc catcagggta
781 gaggatgaaa atgacaacca ccctgttttc acagaagcaa tttataattt tgaagttttg
841 gaaagtagta gacctggtac tacagtgggg gtggtttgtg ccacagacag agatgaaccg
901 gacacaatgc atacgcgcct gaaatacagc attttgcagc agacaccaag gtcacctggg
961 ctcttttctg tgcatcccag cacaggcgta atcaccacag tctctcatta tttggacaga
1021 gaggttgtag acaagtactc attgataatg aaagtacaag acatggatgg ccagtttttt
1081 ggattgatag gcacatcaac ttgtatcata acagtaacag attcaaatga taatgcaccc
1141 actttcagac aaaatgctta tgaagcattt gtagaggaaa atgcattcaa tgtggaaatc
1201 ttacgaatac ctatagaaga taaggattta attaacactg ccaattggag agtcaatttt
1261 accattttaa agggaaatga aaatggacat ttcaaaatca gcacagacaa agaaactaat
1321 gaaggtgttc tttctgttgt aaagccactg aattatgaag aaaaccgtca agtgaacctg
1381 gaaattggag taaacaatga agcgccattt gctagagata ttcccagagt gacagccttg
1441 aacagagcct tggttacagt tcatgtgagg gatctggatg aggggcctga atgcactcct
1501 gcagcccaat atgtgcggat taaagaaaac ttagcagtgg ggtcaaagat caacggctat
1561 aaggcatatg accccgaaaa tagaaatggc aatggtttaa ggtacaaaaa attgcatgat
1621 cctaaaggtt ggatcaccat tgatgaaatt tcagggtcaa tcataacttc caaaatcctg
1681 gatagggagg ttgaaactcc caaaaatgag ttgtataata ttacagtcct ggcaatagac
1741 aaagatgata gatcatgtac tggaacactt gctgtgaaca ttgaagatgt aaatgataat
1801 ccaccagaaa tacttcaaga atatgtagtc atttgcaaac caaaaatggg gtataccgac
1861 attttagctg ttgatcccga tgaacctgtc catggagctc cattttattt cagtttgccc
1921 aatacttctc cagaaatcag tagactgtgg agcctcacca aagttaatga tacagctgcc
1981 cgtctttcat atcagaaaaa tgctggattt caagaatata ccattcctat tactgtaaaa
2041 gacagggccg gccaagctgc aacaaaatta ttgagagtta atctgtgtga atgtactcat
2101 ccaactcagt gtcgtgcgac ttcaaggagt acaggagtaa tacttggaaa atgggcaatc
2161 cttgcaatat tactgggtat agcactgctc ttttctgtat tgctaacttt agtatgtgga
2221 gtttttggtg caactaaagg gaaacgtttt cctgaagatt tagcacagca aaacttaatt
2281 atatcaaaca cagaagcacc tggagacgat agagtgtgct ctgccaatgg atttatgacc
2341 caaactacca acaactctag ccaaggtttt tgtggtacta tgggatcagg aatgaaaaat
2401 ggagggcagg aaaccattga aatgatgaaa ggaggaaacc agaccttgga atcctgccgg
2461 ggggctgggc atcatcatac cctggactcc tgcaggggag gacacacgga ggtggacaac
2521 tgcagataca cttactcgga gtggcacagt tttactcaac cccgtctcgg tgaaaaattg
2581 catcgatgta atcagaatga agaccgcatg ccatcccaag attatgtcct cacttataac
2641 tatgagggaa gaggatctcc agctggttct gtgggctgct gcagtgaaaa gcaggaagaa
2701 gatggccttg actttttaaa taatttggaa cccaaattta ttacattagc agaagcatgc
2761 acaaagagat aatgtcacag tgctacaatt aggtctttgt cagacattct ggaggtttcc
2821 aaaaataata ttgtaaagtt caatttcaac atgtatgtat atgatgattt ttttctcaat
2881 tttgaattat gctactcacc aatttatatt tttaaagcaa gttgttgctt atcttttcca
2941 aaaagtgaaa aatgttaaaa cagacaactg gtaaatctca aactccagca ctggaattaa
3001 ggtctctaaa gcatctgctc tttttttttt ttacggatat tttagtaata aatatgctgg
3061 ataaatatta gtccaacaat agctaagtta tgctaatatc acattattat gtattcactt
3121 taagtgatag tttaaaaaat aaac
//