LOCUS AK291732 2431 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76891 complete cds, highly similar to Homo
sapiens vascular cell adhesion molecule 1 (VCAM1), transcript
variant 1, mRNA.
ACCESSION AK291732
VERSION AK291732.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2431)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2431
/clone="PLACE7011917"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424529"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 120..2339
/codon_start=1
/note="highly similar to Homo sapiens vascular cell
adhesion molecule 1 (VCAM1), transcript variant 1, mRNA"
/protein_id="BAF84421.1"
/transl_table=1
/translation="MPGKMVVILGASNILWIMFAASQAFKIETTPESRYLAQIGDSVS
LTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESR
KLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK
SQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQ
VYISPKNTVISVNPSTKLQEGGSVTMTCSSEGLPAPEIFWSKKLDNGNLQHLSGNATL
TLIAMRMEDSGIYVCEGVNLIGKNRKEVELIVQEKPFTVEISPGPRIAAQIGDSVMLT
CSVMGCESPSFSWRTQIDSPLSGKVRSEGTNSTLTLSPVSFENEHSYLCTVTCGHKKL
EKGIQVELYSFPRDPEIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELLKGETILENI
EFLEDTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQSTQTLYVN
VAPRDTTVLVSPSSILEEGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTL
ISTKMEDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCT
CGNVPETWIILKKKAETGDTVLKSIDGAYTIRKAQLKDAGVYECESKNKVGSQLRSLT
LDVQGRENNKDYFSPELLVLYFASSLIIPAIGMIIYFARKANMKGSYSLVEAQKSKV"
BASE COUNT 733 a 494 c 572 g 632 t
ORIGIN
1 gcggtatctg catcgggcct cactggcttc aggagctgaa taccctccca ggcacacaca
61 ggtgggacac aaataagggt tttggaacca ctattttctc atcacgacag caacttaaaa
121 tgcctgggaa gatggtcgtg atccttggag cctcaaatat actttggata atgtttgcag
181 cttctcaagc ttttaaaatc gagaccaccc cagaatctag atatcttgct cagattggtg
241 actccgtctc attgacttgc agcaccacag gctgtgagtc cccatttttc tcttggagaa
301 cccagataga tagtccactg aatgggaagg tgacgaatga ggggaccaca tctacgctga
361 caatgaatcc tgttagtttt gggaacgaac actcttacct gtgcacagca acttgtgaat
421 ctaggaaatt ggaaaaagga atccaggtgg agatctactc ttttcctaag gatccagaga
481 ttcatttgag tggccctctg gaggctggga agccgatcac agtcaagtgt tcagttgctg
541 atgtataccc atttgacagg ctggagatag acttactgaa aggagatcat ctcatgaaga
601 gtcaggaatt tctggaggat gcagacagga agtccctgga aaccaagagt ttggaagtaa
661 cctttactcc tgtcattgag gatattggaa aagttcttgt ttgccgagct aaattacaca
721 ttgatgaaat ggattctgtg cccacagtaa ggcaggctgt aaaagaattg caagtctaca
781 tatcacccaa gaatacagtt atttctgtga atccatccac aaagctgcaa gaaggtggct
841 ctgtgaccat gacctgttcc agcgagggtc taccagctcc agagattttc tggagtaaga
901 aattagataa tgggaatcta cagcaccttt ctggaaatgc aactctcacc ttaattgcta
961 tgaggatgga agattctgga atttatgtgt gtgaaggagt taatttgatt gggaaaaaca
1021 gaaaagaggt ggaattaatt gttcaagaga aaccatttac tgttgagatc tcccctggac
1081 cccggattgc tgctcagatt ggagactcag tcatgttgac atgtagtgtc atgggctgtg
1141 aatccccatc tttctcctgg agaacccaga tagacagccc tctgagcggg aaggtgagga
1201 gtgaggggac caattccacg ctgaccctga gccctgtgag ttttgagaac gaacactctt
1261 atctgtgcac agtgacttgt ggacataaga aactggaaaa gggaatccag gtggagctct
1321 actcattccc tagagatcca gaaatcgaga tgagtggtgg cctcgtgaat gggagctctg
1381 tcactgtaag ctgcaaggtt cctagcgtgt acccccttga ccggctggag attgaattac
1441 ttaaggggga gactattctg gagaatatag agtttttgga ggatacggat atgaaatctc
1501 tagagaacaa aagtttggaa atgaccttca tccctaccat tgaagatact ggaaaagctc
1561 ttgtttgtca ggctaagtta catattgatg acatggaatt cgaacccaaa caaaggcaga
1621 gtacgcaaac actttatgtc aatgttgccc ccagagatac aaccgtcttg gtcagccctt
1681 cctccatcct ggaggaaggc agttctgtga atatgacatg cttgagccag ggctttcctg
1741 ctccgaaaat cctgtggagc aggcagctcc ctaacgggga gctacagcct ctttctgaga
1801 atgcaactct caccttaatt tctacaaaaa tggaagattc tggggtttat ttatgtgaag
1861 gaattaacca ggctggaaga agcagaaagg aagtggaatt aattatccaa gttactccaa
1921 aagacataaa acttacagct tttccttctg agagtgtcaa agaaggagac actgtcatca
1981 tctcttgtac atgtggaaat gttccagaaa catggataat cctgaagaaa aaagcggaga
2041 caggagacac agtactaaaa tctatagatg gcgcctatac catccgaaag gcccagttga
2101 aggatgcggg agtatatgaa tgtgaatcta aaaacaaagt tggctcacaa ttaagaagtt
2161 taacacttga tgttcaagga agagaaaaca acaaagacta tttttctcct gagcttctcg
2221 tgctctattt tgcatcctcc ttaataatac ctgccattgg aatgataatt tactttgcaa
2281 gaaaagccaa catgaagggg tcatatagtc ttgtagaagc acagaaatca aaagtgtagc
2341 taatgcttga tatgttcaac cggagacact atttatctgt gcaaatcctt gatactgctc
2401 atcattcctt gagaaaaaca atgagctgag a
//