LOCUS AK291714 2614 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78717 complete cds, highly similar to Homo
sapiens transglutaminase 2 (C polypeptide,
protein-glutamine-gamma-glutamyltransferase) (TGM2), transcript
variant 1, mRNA.
ACCESSION AK291714
VERSION AK291714.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2614)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2614
/clone="PLACE7009888"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424511"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 73..2136
/codon_start=1
/note="highly similar to Homo sapiens transglutaminase 2
(C polypeptide, protein-glutamine-gamma-
glutamyltransferase) (TGM2), transcript variant 1, mRNA"
/protein_id="BAF84403.1"
/transl_table=1
/translation="MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLH
FEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSL
QLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYV
LTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPV
YVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQ
CWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNF
HCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPF
VFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSS
EEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLL
LCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRAL
LVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTV
EGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNV
IIGPA"
BASE COUNT 550 a 790 c 789 g 485 t
ORIGIN
1 tgtgccagcc gccagtggtc gcacttggag ggtctcgccg ccagtggaag gagccaccgc
61 ccccgcccga ccatggccga ggagctggtc ttagagaggt gtgatctgga gctggagacc
121 aatggccgag accaccacac ggccgacctg tgccgggaga agctggtggt gcgacggggc
181 cagcccttct ggctgaccct gcactttgag ggccgcaact acgaggccag tgtagacagt
241 ctcaccttca gtgtcgtgac cggcccagcc cctagccagg aggccgggac caaggcccgt
301 tttccactaa gagatgctgt ggaggagggt gactggacag ccaccgtggt ggaccagcaa
361 gactgcaccc tctcgctgca gctcaccacc ccggccaacg cccccatcgg cctgtatcgc
421 ctcagcctgg aggcctccac tggctaccag ggatccagct ttgtgctggg ccacttcatt
481 ttgctcttca acgcctggtg cccagcggat gctgtgtacc tggactcgga agaggagcgg
541 caggagtatg tcctcaccca gcagggcttt atctaccagg gctcggccaa gttcatcaag
601 aacatacctt ggaattttgg gcagtttgaa gatgggatcc tagacatctg cctgatcctt
661 ctagatgtca accccaagtt cctgaagaac gccggccgtg actgctcccg ccgcagcagc
721 cccgtctacg tgggccgggt ggtgagtggc atggtcaact gcaacgatga ccagggtgtg
781 ctgctgggac gctgggacaa caactacggg gacggcgtca gccccatgtc ctggatcggc
841 agcgtggaca tcctgcggcg ctggaagaac cacggctgcc agcgcgtcaa gtatggccag
901 tgctgggtct tcgccgccgt ggcctgcaca gtgctgaggt gcctgggcat ccctacccgc
961 gtcgtgacca actacaactc ggcccatgac cagaacagca accttctcat cgagtacttc
1021 cgcaatgagt ttggggagat ccagggtgac aagagcgaga tgatctggaa cttccactgc
1081 tgggtggagt cgtggatgac caggccggac ctgcagccgg ggtacgaggg ctggcaggcc
1141 ctggacccaa cgccccagga gaagagcgaa gggacgtact gctgtggccc agttccagtt
1201 cgtgccatca aggagggcga cctgagcacc aagtacgatg cgccctttgt ctttgcggag
1261 gtcaatgccg acgtggtaga ctggatccag caggacgatg ggtctgtgca caaatccatc
1321 aaccgttccc tgatcgttgg gctgaagatc agcactaaga gcgtgggccg agacgagcgg
1381 gaggatatca cccacaccta caaataccca gaggggtcct cagaggagag ggaggccttc
1441 acaagggcga accacctgaa caaactggcc gagaaggagg agacagggat ggccatgcgg
1501 atccgtgtgg gccagagcat gaacatgggc agtgactttg acgtctttgc ccacatcacc
1561 aacaacaccg ctgaggagta cgtctgccgc ctcctgctct gtgcccgcac cgtcagctac
1621 aatgggatct tggggcccga gtgtggcacc aagtacctgc tcaacctcaa cctggagcct
1681 ttctctgaga agagcgttcc tctttgcatc ctctatgaga aataccgtga ctgccttacg
1741 gagtccaacc tcatcaaggt gcgggccctc ctcgtggagc cagttatcaa cagctacctg
1801 ctggctgaga gggacctcta cctggagaat ccagaaatca agatccggat ccttggggag
1861 cccaagcaga aacgcaagct ggtggctgag gtgtccctgc agaacccgct ccctgtggcc
1921 ctggaaggct gcaccttcac tgtggagggg gccggcctga ctgaggagca gaagacggtg
1981 gagatcccag accccgtgga ggcaggggag gaagttaagg tgagaatgga cctgctgccg
2041 ctccacatgg gcctccacaa gctggtggtg aacttcgaga gcgacaagct gaaggctgtg
2101 aagggcttcc ggaatgtcat cattggcccc gcctaaggga cccctgctcc cagcctgctg
2161 agagccccca ccttgatccc aatccttatc ccaagctagt gagcaaaata tgccccttct
2221 tgggccccag accccagggc agggtgggca gcctatgggg gctctcggaa atggaatgtg
2281 cccctggccc atctcagcct cctgagcctg tgggtcccca ctcaccccct ttgctgtgag
2341 gaatgctctg tgccagaaac agtgggagcc ctgaccttgg ctgactgggg ctggggtgag
2401 agaggaaaga cctacattcc ctctcctgcc cagatgccct ttggaaagcc attgaccacc
2461 caccatattg tttgatctac ttcatagctc cttggagcag gcaaaaaagg gacagcatgc
2521 cccttggctg gatcagggaa tccagctccc tagactgcat cccgtacctc ttcccatgac
2581 tgcacccagc tccaggggcc cttgggacag ccag
//