LOCUS AK291692 3245 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76885 complete cds, highly similar to Homo
sapiens dystroglycan 1 (dystrophin-associated glycoprotein 1)
(DAG1), mRNA.
ACCESSION AK291692
VERSION AK291692.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3245
/clone="PLACE7006957"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424489"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 261..2948
/codon_start=1
/note="highly similar to Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) (DAG1), mRNA"
/protein_id="BAF84381.1"
/transl_table=1
/translation="MRMSVGLSLLLPLWGRTFLLLLSVVMAQSHWPSEPSEAVRDWEN
QLEASMHSVLSDLHEAVPTVVGIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKE
ALPSWLHWDSQSHTLEGLPLDTDKGVHYISVSATRLGANGSHIPQTSSVFSIEVYPED
HSELQSVRTASPDPGEVVSSACAADEPVTVLTVILDADLTKMTPKQRIDLLHRMRSFS
EVELHNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIHG
VEAPAREGAMSAQLGYPVVGWHIANKKPPLPKRVRRQIHATPAPVTAIGPPTTAIQEP
PSRIVPTPTSPAIAPPTETMAPPVRDPVPGKPTVTIRTRGAIIQTPTLGPIQPTRVSE
AGTTVPGQIRPTMTIPGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSTTTTTRRPT
KKPRTPRPVPRVTTKVSITRLETASPPTRIRTTTSGVPRGGEPNQRPELKNHIDRVDA
WVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPD
SSHVGKHEYFMHATDKGGLSAVDAFEIHVHRRPQGDRAPARFKAKFVGDPALVLNDIH
KKIALVKKLAFAFGDRNCSTITLQNITRGSIVVEWTNNTLPLEPCPKEQIAGLSRRIA
EDDGKPRPAFSNALEPDFKATSITVTGSGSCRHLQFIPVVPPRRVPSEAPPTEVPDRD
PEKSSEDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRKGKLTLEDQATFIKKGVPI
IFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQSVPETTPLNQDTMGEYTPLRDE
DPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP"
BASE COUNT 712 a 1026 c 878 g 629 t
ORIGIN
1 aaggctgcgg cgcggcgctc gcgcctctta ggcttggcgg tggcggcggc ggcagcttcg
61 cgccgaatcc ccggggagcg gcggtggcgg cgtcctgggg ccaggaggag cgaacacctg
121 ccgcagtcct cccgccggcg ctgggctctg tgtgctccgg gatggagcag gtgtgcagag
181 ggtgagaacc cagctctggg accaagtcac ttgcttcctt acttagcaag actatcgact
241 tgagcaaact tggacctggg atgaggatgt ctgtgggcct ctcgctgctg ctgcccctct
301 gggggaggac ctttctcctc ctgctctctg tggttatggc tcagtcccac tggcccagtg
361 aaccctcaga ggctgtcagg gactgggaaa accagcttga ggcatccatg cactcagtgc
421 tctcagacct ccacgaggct gttcccacag tggttggcat tcctgatggc acggctgtcg
481 tcgggcgctc atttcgagtg accattccaa cagatttgat tgcctccagt ggagatatca
541 tcaaggtatc agcggcaggg aaggaggctt tgccatcttg gctgcactgg gactcacaga
601 gccacaccct ggagggcctc ccccttgaca ctgataaggg tgtgcattac atttcagtga
661 gcgctacacg gctgggggcc aacgggagcc acatccccca gacctccagt gtgttctcca
721 tcgaggtcta ccctgaagac cacagtgagc tgcagtcggt gaggacagcc tccccagacc
781 ctggtgaggt ggtatcatct gcctgtgctg cggatgaacc tgtgactgtt ttgacggtga
841 ttttggatgc cgacctcacc aagatgaccc caaagcaaag gattgacctc ctgcacagga
901 tgcggagctt ctcagaagta gagcttcaca acatgaaatt agtgccggtg gtgaataaca
961 gactatttga catgtcggcc ttcatggctg gcccgggaaa tgcaaaaaag gtggtggaga
1021 atggggccct tctctcctgg aagctgggct gctccctgaa ccagaacagt gtgcctgaca
1081 ttcatggtgt agaggcccct gccagggagg gcgcaatgtc tgctcagctt ggctaccctg
1141 tggtgggttg gcacatcgcc aataagaagc cccctcttcc caaacgcgtc cggaggcaga
1201 tccatgctac acccgcacct gtcactgcca ttgggccccc aaccacggct atccaggagc
1261 ccccatccag gatcgtgcca acccccacat ctccagccat tgctcctcca acagagacca
1321 tggctcctcc agtcagggat cctgttcctg ggaaacccac ggtcaccatc cggactcgag
1381 gcgccattat tcaaacccca accctaggcc ccatccagcc tactcgggtg tcagaagctg
1441 gcaccacagt tcctggccag attcgcccaa cgatgaccat tcctggctat gtggagccta
1501 ctgcagttgc tacccctccc acaaccacca ccaagaagcc acgagtatcc acaccaaaac
1561 cagcaacgcc ttcaactgac tccaccacca ccacgactcg caggccaacc aagaaaccac
1621 ggacaccccg gccagtgccc cgggtcacca ccaaagtttc catcaccaga ttggaaactg
1681 cctcaccgcc tactcgtatt cgcaccacca ccagtggagt gccccgtggc ggagaaccca
1741 accagcgccc agagctcaag aaccatattg acagggtaga tgcctgggtt ggcacctact
1801 ttgaggtgaa gatcccgtca gacactttct atgaccatga ggacaccacc actgacaagc
1861 tgaagctgac cctgaaactg cgggagcagc agctggtggg cgagaagtcc tgggtacagt
1921 tcaacagcaa cagccagctc atgtatggcc ttcccgacag cagccacgtg ggcaaacacg
1981 agtatttcat gcatgccaca gacaaggggg gcctgtcggc tgtggatgcc ttcgagatcc
2041 acgtccacag gcgcccccaa ggggataggg ctcctgcaag attcaaggcc aagtttgtgg
2101 gtgacccggc actggtgttg aatgacatcc acaagaagat tgccttggta aagaaactgg
2161 ccttcgcctt tggagaccga aactgtagca ccatcaccct gcagaatatc acccggggct
2221 ccatcgtggt ggaatggacc aacaacacac tgcccttgga gccctgcccc aaggagcaga
2281 tcgctgggct gagccgccgg atcgctgagg atgatggaaa acctcggcct gccttctcca
2341 acgccctaga gcctgacttt aaggccacaa gcatcactgt gacgggctct ggcagttgtc
2401 ggcacctaca gtttatccct gtggtaccac ccaggagagt gccctcagag gcgccgccca
2461 cagaagtgcc tgacagggac cctgagaaga gcagtgagga tgatgtctac ctgcacacag
2521 tcattccggc cgtggtggtc gcagccatcc tgctcattgc tggcatcatt gccatgatct
2581 gctaccgcaa gaagcggaag ggcaagctta cccttgagga ccaggccacc ttcatcaaga
2641 agggggtgcc tatcatcttt gcagacgaac tggacgactc caagccccca ccctcctcca
2701 gcatgccact cattctgcag gaggagaagg ctcccctacc ccctcctgag taccccaacc
2761 agagtgtgcc cgagaccact cctctgaacc aggacaccat gggagagtac acgcccctgc
2821 gggatgagga tcccaatgcg cctccctacc agcccccacc gcccttcaca gcacccatgg
2881 agggcaaggg ctcccgtccc aagaacatga ccccataccg gtcacctcct ccctatgtcc
2941 caccttaacc cgcaagcgcc tgggtggagg cagggtaggg caggggcctg gagacgacat
3001 ggtgttgtct gtggagaccg gtggcctgca gaccattgcc caccgggagc cgacacctga
3061 cctagcacac actgacacag gggcctggac aagcccgccc tctctggtcc tcccaaaccc
3121 caaagcagct ggagagactt tggggacttt tttattttta ttttttgcct aacagctttt
3181 ggtttgttca tagaggactc ttcgcttcat ttttgatggc tggctctgaa agcaccatgt
3241 ggagt
//