LOCUS AK291687 3371 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77150 partial cds, highly similar to Homo
sapiens nuclear protein, ataxia-telangiectasia locus (NPAT), mRNA.
ACCESSION AK291687
VERSION AK291687.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3371)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3371
/clone="PLACE7006323"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424484"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 27..>3371
/codon_start=1
/note="ighly similar to Homo sapiens nuclear protein,
ataxia-telangiectasia locus (NPAT), mRNA"
/protein_id="BAF84376.1"
/transl_table=1
/translation="MLLPSDVARLVLGYLQQENLISTCQTFILESSDLKEYAEHCTDE
GFIPACLLSLFGKNLTTILNEYVAMKTKETSNNVPAIMSSLWKKLDHTLSQIRSMQNS
PRFAGSQRARTRTGIAEIKRQRKLASQTAPASAELLTLPYLSGQFTTPPSTGTQVTRP
SGQISDPSRSYFVVVNHSQSQDTVTTGEALNVIPGAQEKKAHASLMSPGRRKSESQRK
STTLSGPHSTIRNFQDPNAFAVEKQMVIENAREKILSNKSLQEKLAENINKFLTSDNN
IAQVPKQTDNNPTEPETSIDEFLGLPSEIHMSEEAIQDILEQTESDPAFQALLDLFDY
GKTKNNKNISQSISSQPMESNPSIVLADETNLAVKGSFETEESDGQSGQPAFCTSYQN
DDPLNALKNSNNHDVLRQEDQENFSQISTSIQKKAFKTAVPTEQKCDIDITFESVPNL
NDFNQRGNSNAECNPHCAELYTNQMSTETEMAIGIEKNSLSSNVPSESQLQPDQPDIP
ITSFVSLGCEANNENLILSGKSSQLLSQDTSLTGKPSKKSQFCENSNDTVKLKINFHG
SKSSDSSEIHKSKIEINVLEPVMSQLSNCQDNSCLQSEILPVSVESSHLNVSGQVEIH
LGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSLGGNANC
EKVALTPPEGTPVENSHSLPPESVCSSVGDSHPESQNTDDKPSSNNSAEIDASNIVSL
KVIISDDPFVSSDTELTSAVSSINGENLPTIILSSPTKSPTKNAELVKCLSSEETVGA
VVYAEVGDSASMEQSLLTFKSEDSAVNNTQNEDGIAFSANVTPCVSKDGGYIQLMPAT
STAFGNSNNILIATCVTDPTALGTSVSQSNVVVLPGNSAPMTAQPLPPQLQTPPRSNS
VFAVNQAVSPNFSQGSAIIIASPVQPVLQGMVGMIPVSVVGQNGNNFSTPPRQVLHMP
LTAPVCNRSIPQFPVPPKSQKAQGLRKKPCIGKQVNNLVDSSGHSVGCHAQKTEVSDK
SIATDLGKKSEETTVPFPEESIVPAAKPCHRRVLCFDSTTAPVANTQGPNHKMVSQNK
ERNAVSFPNLDSPNVSSTLKPPSNNAI"
BASE COUNT 1113 a 721 c 610 g 927 t
ORIGIN
1 ttgtggttcc tgctgtggtt ttgatcatgt tgttaccctc ggacgtagcc cggcttgtat
61 tgggttactt acagcaagaa aacctcattt ctacctgcca gacttttatt ttggaaagtt
121 cagatttaaa agaatatgca gaacattgta cagatgaagg gtttattcca gcctgcttac
181 tgtccttatt tggaaaaaac ttgacaacaa ttttaaatga gtatgtagct atgaaaacaa
241 aagaaacatc aaataatgtc ccagcaataa tgtcatctct atggaagaaa ttggaccata
301 cactttctca gatcaggagc atgcaaaatt ccccaaggtt tgctggcagt cagagagccc
361 gaacgagaac tggaattgca gaaatcaaac ggcagagaaa gcttgcatct caaacagctc
421 cagccagtgc agagttgctc actttacctt acctttcagg acagtttacc actcctcctt
481 ccacaggtac acaggttact cgaccaagtg gccaaatttc agatccatcg aggtcatatt
541 ttgtagtggt caaccactca cagtcacaag atactgtaac cactggagaa gctttaaatg
601 tcattcctgg tgctcaggaa aagaaagcac atgccagttt aatgtctccc ggtagacgca
661 aaagtgaatc tcagagaaaa agtaccactt tgtctggccc tcattcaaca atacggaatt
721 tccaagatcc aaacgctttt gcagtagaaa aacaaatggt tattgaaaat gcacgagaaa
781 aaatactaag caacaaatct cttcaagaaa agctagcaga aaacataaat aaatttttaa
841 ctagtgataa caatattgcc caagtaccta agcaaacaga taacaaccct acggagccag
901 agacttcaat tgatgaattc ctaggacttc cgagtgaaat tcacatgtct gaagaagcta
961 tacaggacat attggaacag acagaatcag acccagcatt tcaggcactc cttgatctct
1021 ttgactatgg caaaacaaag aataataaaa atatatcaca aagtatttcc agtcaaccta
1081 tggaatccaa tcccagtata gtcttagcag atgaaactaa tctagcagtt aaaggttctt
1141 ttgaaacaga agaatctgat ggtcagtctg gtcagcccgc tttttgtaca tcctatcaga
1201 atgatgaccc attaaatgct ttgaagaata gtaacaacca tgatgtgctt agacaagaag
1261 accaggaaaa tttttcccaa ataagtacca gcatacagaa aaaggccttt aaaacagctg
1321 tacccactga acagaagtgt gacattgaca ttacctttga gtccgtgcct aatttgaatg
1381 actttaacca aagagggaat tctaatgctg aatgtaatcc acattgtgct gaattataca
1441 ccaatcagat gtccactgaa actgaaatgg ctatagggat tgaaaagaac tctttgtctt
1501 caaatgtacc gagtgaatct cagttacagc ctgatcagcc tgatatacca ataacttcat
1561 ttgtttcact tggttgtgaa gctaacaatg aaaacttaat tctctctggg aagagttctc
1621 aacttttatc ccaagatact tcattaactg gaaagccatc taaaaaaagt caattttgtg
1681 aaaattctaa tgatacagta aaacttaaaa ttaattttca tggttccaag tcatctgatt
1741 ctagtgaaat tcacaagagt aaaatagaaa ttaatgtgtt agaaccagtt atgtcacagc
1801 tatcaaattg ccaagataat tcttgtcttc aaagtgaaat actacctgtg tctgttgaaa
1861 gttcacattt aaatgtatct ggacaagtag aaattcatct tggagattcg ctgtcttcta
1921 ctaaacaacc atctaatgat tcagcatctg ttgagttaaa tcatacagaa aatgaagctc
1981 aggcatccaa gtctgagaat tcacaggagc cttcatcttc tgtaaaagaa gagaatacta
2041 tttttctctc tttaggtgga aatgctaact gtgagaaagt tgcactgacg cctccagaag
2101 gcactcctgt agaaaacagt cactctcttc ctccagaatc tgtgtgttct tcagtgggag
2161 attctcaccc tgagtcccaa aatactgatg ataaaccttc tagcaacaac tcagcagaga
2221 tagatgcatc aaatatcgtc tctctcaaag ttatcattag tgatgatcca tttgtttcct
2281 cagatactga acttaccagt gctgtttcta gtattaatgg agaaaacctg ccaactataa
2341 tcttgtcttc tcctactaaa tcacctacta aaaatgcaga actagttaaa tgcctatctt
2401 cagaagaaac tgtaggtgct gttgtatatg ccgaagtagg ggattcagcc tcaatggaac
2461 agagtctttt aacattcaaa tctgaagact ctgcagtaaa caatactcag aatgaagatg
2521 gcattgcttt ttcagctaat gttacaccat gtgtttccaa ggatggagga tatatacagt
2581 tgatgccagc cacaagcaca gcttttggca attcaaataa cattctgata gctacctgtg
2641 tgactgatcc aacagcgtta ggaacatctg taagtcagtc taatgtagtg gtgttgcctg
2701 gaaattctgc acctatgact gctcaacctc taccacctca gttacagaca ccaccaaggt
2761 caaacagtgt atttgctgtc aaccaagctg tgtcaccaaa cttttcacaa ggatctgcca
2821 taataattgc ctctccagtc cagcctgtac tccaaggaat ggtagggatg atcccagtat
2881 ctgtggttgg acagaatgga aataactttt ctactcctcc tcggcaggtt cttcatatgc
2941 ctttgacagc acctgtatgc aatagaagta tccctcaatt ccccgtccct ccaaaatctc
3001 agaaggctca gggactaaga aaaaagcctt gtataggaaa acaagtaaat aatttggtgg
3061 attcgtcagg tcattcagtt ggatgtcatg cacaaaaaac tgaagtttct gacaaaagta
3121 ttgccacaga tcttgggaaa aaatcagaag aaaccacagt tcccttccca gaagagagta
3181 tagttccagc tgctaaacca tgccacagac gtgtactctg tttcgacagc actactgctc
3241 ctgtggcaaa tacgcagggg ccaaaccata agatggtgtc ccaaaacaaa gaaaggaatg
3301 cagtctcttt tcctaatctt gactcaccca atgtgtcctc caccttaaaa cccccttcta
3361 ataatgctat c
//