LOCUS AK291661 1866 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77425 complete cds, highly similar to Homo
sapiens peroxisome proliferative activated receptor, delta
(PPARD), transcript variant 1, mRNA.
ACCESSION AK291661
VERSION AK291661.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1866)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1866
/clone="PLACE7004689"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000424458"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 269..1594
/codon_start=1
/note="highly similar to Homo sapiens peroxisome
proliferative activated receptor, delta (PPARD),
transcript variant 1, mRNA"
/protein_id="BAF84350.1"
/transl_table=1
/translation="MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTD
LSRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGGKASGFHYGVHACEGCKGFFRRTI
RMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGL
TANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIET
LWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLN
DQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF
AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDA
QYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY"
BASE COUNT 412 a 562 c 526 g 366 t
ORIGIN
1 gatgggaaaa gttttggcag gagcgggaga attctgcgga gcctgcggga cggcggcggt
61 ggcgccgtag gcagccggga cagtgttgta cagtgttttg ggcatgcacg tgatactcac
121 acagtggctt ctgctcacca acagatgaag acagatgcac caacgaggct gatgggaacc
181 atcctgtaga ggtccatctg cgttcagacc cagacgatgc cagagctatg actgggcctg
241 caggtgtggc gccgagggga gatcagccat ggagcagcca caggaggaag cccctgaggt
301 ccgggaagag gaggagaaag aggaagtggc agaggcagaa ggagccccag agctcaatgg
361 gggaccacag catgcacttc cttccagcag ctacacagac ctctcccgga gctcctcgcc
421 accctcactg ctggaccaac tgcagatggg ctgtgacggg gcctcatgcg gcagcctcaa
481 catggagtgc cgggtgtgcg ggggcaaggc atcgggcttc cactacggtg ttcatgcatg
541 tgaggggtgc aagggcttct tccgtcgtac gatccgcatg aagctggagt acgagaagtg
601 tgagcgcagc tgcaagattc agaagaagaa ccgcaacaag tgccagtact gccgcttcca
661 gaagtgcctg gcactgggca tgtcacacaa cgctatccgt tttggtcgga tgccggaggc
721 tgagaagagg aagctggtgg cagggctgac tgcaaatgag gggagccagt acaacccaca
781 ggtggccgac ctgaaggcct tctccaagca catctacaat gcctacctga aaaacttcaa
841 catgaccaaa aagaaggccc gcagcatcct caccggcaaa gccagccaca cggcgccctt
901 tgtgatccac gacatcgaga cattgtggca ggcagagaag gggctggtgt ggaagcagtt
961 ggtgaatggc ctgcctccct acaaggagat cagcgtgcac gtcttctacc gctgccagtg
1021 caccacagtg gagaccgtgc gggagctcac tgagttcgcc aagagcatcc ccagcttcag
1081 cagcctcttc ctcaacgacc aggttaccct tctcaagtat ggcgtgcacg aggccatctt
1141 cgccatgctg gcctctatcg tcaacaagga cgggctgctg gtagccaacg gcagtggctt
1201 tgtcacccgt gagttcctgc gcagcctccg caaacccttc agtgatatca ttgagcctaa
1261 gtttgaattt gctgtcaagt tcaacgccct ggaacttgat gacagtgacc tggccctatt
1321 cattgcggcc atcattctgt gtggagaccg gccaggcctc atgaacgttc cacgggtgga
1381 ggctatccag gacaccatcc tgcgtgccct cgaattccac ctgcaggcca accaccctga
1441 tgcccagtac ctcttcccca agctgctgca gaagatggct gacctgcggc aactggtcac
1501 cgagcacgcc cagatgatgc agcggatcaa gaagaccgaa accgagacct cgctgcaccc
1561 tctgctccag gagatctaca aggacatgta ctaacggcgg cacccaggcc tccctgcaga
1621 ctccaatggg gccagcactg gaggggccca cccacatgac ttttccattg accagccctt
1681 gagcacccgg cctggagcag cagagtccca cgatcgccct cagacacatg acacccacgg
1741 cctctggctc cctgtgccct ctctcccgct tcctccagcc agctctcttc ctgtctttgt
1801 tgtctccctc tttctcagtt cctctttctt ttctaattcc tgttgctctg tttcttcctt
1861 tctgta
//