LOCUS AK291487 2072 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75871 complete cds, highly similar to Homo
sapiens staufen, RNA binding protein (STAU), transcript variant
T3, mRNA.
ACCESSION AK291487
VERSION AK291487.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2072)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2072
/clone="OCBBF3028145"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424284"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 330..2063
/codon_start=1
/note="highly similar to Homo sapiens staufen, RNA
binding protein (STAU), transcript variant T3, mRNA"
/protein_id="BAF84176.1"
/transl_table=1
/translation="MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPS
ENAGRPIQNPALPSASITSTSAAAESITPTVELNALCMKLGKKPMYKPVDPYSRMQST
YNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL
QNEPLPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVT
KVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPAVERVKPRIKKKTKPIVKPQ
TSPEYGQGINPISRLAQIQQAKKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTG
TNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTPIKKPGDGRKVTFFEPGSGD
ENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTRAAPNPAKAT
VTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSRVQGFQVEYKD
FPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSTEMPRT
GNGPMSVCGRC"
BASE COUNT 584 a 552 c 484 g 452 t
ORIGIN
1 cctttgaccg cctccccccc cggcccggcg gcgcccgcct cctccacggc cactccgcct
61 cttccctccc ttcgtccctt cttcctctcc cttttttcct tcttccttcc cctcctcgcc
121 gccaccgccc aggaccgccg gccgggggac gagctcggag cagcagccag agtttattaa
181 ccacttaacc tctcagaact gaacaaagac aacattgttc ctggaacgcc ctctttttaa
241 aaaaggtaga actttagact tcatagcact gaattaacct gcactgaaag ctgtttacct
301 gcatttgttc acttttgttg aaagtgacca tgtctcaagt tcaagtgcaa gttcagaacc
361 catctgctgc tctctcaggg agccaaatac tgaacaagaa ccagtctctt ctctcacagc
421 ctttgatgag tattccttct actactagct ctctgccctc tgaaaatgca ggtagaccca
481 ttcaaaaccc tgctttaccc tctgcatcta ttacatccac cagtgcagct gcagaaagca
541 taacccctac tgtagaacta aatgcactgt gcatgaaact tggaaaaaaa ccaatgtata
601 agcctgttga cccttactct cggatgcagt ccacctataa ctacaacatg agaggaggtg
661 cttatccccc gaggtacttt tacccatttc cagttccacc tttactttat caagtggaac
721 tttctgtggg aggacagcaa tttaatggca aaggaaagac aagacaggct gcgaaacacg
781 atgctgctgc caaagcgttg aggatcctgc agaatgagcc cctgccagag aggctggagg
841 tgaatggaag agaatccgaa gaagaaaatc tcaataaatc tgaaataagt caagtgtttg
901 agattgcact taaacggaac ttgcctgtga atttcgaggt ggcccgggag agtggcccac
961 cccacatgaa gaactttgtg accaaggttt cggttgggga gtttgtgggg gaaggtgaag
1021 ggaaaagcaa gaagatttca aagaaaaatg ccgccatagc tgttcttgag gagctgaaga
1081 agttaccgcc cctgcctgca gttgaacgag taaagcctag aatcaaaaag aaaacaaaac
1141 ccatagtcaa gccacagaca agcccagaat atggccaggg gatcaatccg attagccgac
1201 tggcccagat ccagcaggca aaaaaggaga aggagccaga gtacacgctc ctcacagagc
1261 gaggcctccc gcgccgcagg gagtttgtga tgcaggtgaa ggttggaaac cacactgcag
1321 aaggaacggg caccaacaag aaggtggcca agcgcaatgc agccgagaac atgctggaga
1381 tccttggttt caaagtcccg caggcgcagc ccaccaaacc cgcactcaag tcagaggaga
1441 agacacccat aaagaaacca ggggatggaa gaaaagtaac cttttttgaa cctggctctg
1501 gggatgaaaa tgggactagt aataaagagg atgagttcag gatgccttat ctaagtcatc
1561 agcagctgcc tgctggaatt cttcccatgg tgcccgaggt cgcccaggct gtaggagtta
1621 gtcaaggaca tcacaccaaa gattttacca gggcagctcc gaatcctgcc aaggccacgg
1681 taactgccat gatagcccga gagttgttgt atgggggcac ctcgcccaca gccgagacca
1741 ttttaaagaa taacatctct tcaggccacg taccccatgg acctctcacg agaccctctg
1801 agcaactgga ctatctttcc agagtccagg gattccaggt tgaatacaaa gacttcccca
1861 aaaacaacaa gaacgaattt gtatctctta tcaattgctc ctctcagcca cctctgatca
1921 gccatggtat cggcaaggat gtggagtcct gccatgatat ggctgcgctg aacatcttaa
1981 agttgctgtc tgagttggac caacaaagta cagagatgcc aagaacagga aacggaccaa
2041 tgtctgtgtg tgggaggtgc tgaacctttt ct
//