LOCUS AK291484 3432 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77751 complete cds, highly similar to Homo
sapiens SREBP cleavage-activating protein (SCAP), mRNA.
ACCESSION AK291484
VERSION AK291484.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3432)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3432
/clone="OCBBF3027404"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424281"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 629..3289
/codon_start=1
/note="highly similar to Homo sapiens SREBP
cleavage-activating protein (SCAP), mRNA"
/protein_id="BAF84173.1"
/transl_table=1
/translation="MKNMATELGIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMLFF
TTVLSIDIRRMELADLNKRLPPEACLPSAKPVGQPTRYERQLAVRPSTPHTITLQPSS
FRNLRLPKRLRVVYFLARTRLAQRLIMAGTVVWIGILVYTDPAGLRNYLAAQVTEQSP
LGEGALAPMPVPSGMLPPSHPDPAFSIFPPDAPKLPENQTSPGESPERGGPAEVVHDS
PVPEVTWGPEDEELWRKLSFRHWPTLFSYYNITLAKRYISLLPVIPVTLRLNPREALE
GRHPQDGRSAWPPPGPIPAGHWEAGPKGPGGVQAHGDVTLYKVAALGLATGIVLVLLL
LCLYRVLCPRNYGQLGGGPGWRRRGELPCDDYGYAPPETEIVPLVLRGHLMDIECLAS
DGMLLVSCCLAGHICVWDAQTGDCLTRIPRPGQRRDSGVGSGLEAQESWERLSDGGKA
GPEEPGDSPPLRHRPRGPPPPSLFGDQPDLTCLIDTNFSAQPRSSQPTQPEPRHRAVC
GRSRDSPGYDFSCLVQRVYQEEGLAAVCTPALRPPSPGPVLSQAPEDEGGSPEKGSPS
LAWAPSAEGSIWSLELQGNLIVVGRSSGRLEVWDAIEGVLCCSSEEVSSGITALVFLD
KRIVAARLNGSLDFFSLETHTALSPLQFRGTPGRGSSPASPVYSSSDTVACHLTHTVP
CAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQTMVL
ASGGQDGAICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGI
KFYSIQQDLGCGASLGVISDNLLVTGGQGCVSFWDLNYGDLLQTVYLGKNSEAQPARQ
ILVLDNAAIVCNFGSELSLVYVPSVLEKLD"
BASE COUNT 607 a 1113 c 1044 g 668 t
ORIGIN
1 acccggcggc caggagagag agggagggcg ccacgcaccg gactgcgggc cgagagcgcg
61 cacgccgcgc tccgcccctg ctgccgcccc cgtcgccgcc gccgccgccg ccgcagcttg
121 ggaggtgctg ccaccacagg tacctgcaca tgttgttctt tgtcagtgct gtcaagtgtg
181 tgccagggtg atccatggtc actttccggg atggcagcaa ggtgacttcg gctgaggatg
241 accctgactg aaaggctgcg tgagaagata tctcgggcct tctacaacca tgggctcctc
301 tgtgcatcct atcccatccc catcatcctc ttcacagggt tctgcatctt agcctgctgc
361 tacccactgc tgaaactccc cttgccagga acaggacctg tggaattcac cacccctgtg
421 aaggattact cgcccccacc tgtggactct gaccgcaaac aaggagagcc tactgagcag
481 cctgagtggc gagattttcc cctaccttgt ggtggttatt gggttagaga atgtgttggt
541 gctcaccaag tctgtggtct caaccccggt agacctggag gtgaagctgc ggatcgccca
601 aggcctaagc agcgagagct ggtccatcat gaagaacatg gccacggagc tgggcatcat
661 cctcatcggc tacttcaccc tagtgcccgc catccaggag ttctgtctct ttgctgtcgt
721 ggggctggtg tctgacttct tccttcagat gctgtttttc accactgtcc tgtccattga
781 cattcgccgg atggagctag cagacctgaa caagcgactg ccccctgagg cctgcctgcc
841 ctcagccaag ccagtggggc agccaacgcg ctacgagcgg cagctggctg tgaggccgtc
901 cacaccccac accatcacgt tgcagccgtc ttccttccga aacctgcggc tccccaagag
961 gctgcgtgtt gtctacttcc tggcccgcac ccgcctggca cagcgcctca tcatggctgg
1021 caccgttgtc tggattggca tcctggtata cacagaccca gcagggctgc gcaactacct
1081 cgctgcccag gtgacggaac agagcccatt gggtgaggga gccctggctc ccatgcccgt
1141 gcctagtggc atgctgcccc ccagccaccc ggaccctgcc ttctccatct tcccacctga
1201 tgcccctaag ctacctgaga accagacgtc gccaggcgag tcacctgagc gtggaggtcc
1261 agcagaggtt gtccatgaca gcccagtccc agaggtaacc tgggggcctg aggatgagga
1321 actttggagg aaattgtcct tccgccactg gccgacgctc ttcagctatt acaacatcac
1381 actggccaag aggtacatca gcctgctgcc cgtcatccca gtcacgctcc gcctgaaccc
1441 gagggaggct ctggagggcc ggcaccctca ggacggccgc agtgcctggc ccccaccggg
1501 gcccatacct gctgggcact gggaagcagg acccaagggc ccaggtgggg tgcaggccca
1561 tggagacgtc acgctgtaca aggtggcggc gctgggcctg gccaccggca tcgtcttggt
1621 gctgctgctg ctctgcctct accgcgtgct atgcccgcgc aactacgggc agctgggtgg
1681 tgggcccggg tggcggaggc gcggggagct gccctgcgac gactacggct atgccccacc
1741 cgagacggag atcgtgccgc ttgtgctgcg cggccacctc atggacatcg agtgcctggc
1801 cagcgacggc atgctgctgg tgagctgctg cctggcaggc cacatctgcg tgtgggacgc
1861 gcagaccggg gattgcctaa cgcgcattcc gcgcccaggg cagcgccggg acagtggcgt
1921 gggcagcggg cttgaggctc aggagagctg ggaacgactt tcagatggtg ggaaggctgg
1981 tccagaggag cctggggaca gccctcccct gagacaccgc ccccggggcc ctccgccgcc
2041 ttccctcttc ggggaccagc ctgacctcac ctgcttaatt gacaccaact tttcagcgca
2101 gcctcggtcc tcacagccca ctcagcccga gccccggcac cgggcggtct gtggccgctc
2161 tcgggactcc ccaggctatg acttcagctg cctggtgcag cgggtgtacc aggaggaggg
2221 gctggcggcc gtctgcacac cagccctgcg cccaccctcg cctgggccgg tgctgtccca
2281 ggcccctgag gacgagggtg gctcccccga gaaaggctcc ccttccctcg cctgggcccc
2341 cagtgccgag ggttccatct ggagcttgga gctgcagggc aacctcatcg tggtggggcg
2401 gagcagcggc cggctggagg tgtgggacgc cattgaaggg gtgctgtgct gcagcagcga
2461 ggaggtctcc tcaggcatta ccgctctggt gttcttggac aaaaggattg tggctgcacg
2521 gctcaacggt tcccttgatt tcttctcctt ggagacccac actgccctca gccccctgca
2581 gtttagaggg accccagggc ggggcagttc ccctgcctct ccagtgtaca gcagcagcga
2641 cacagtggcc tgtcacctga cccacacagt gccctgtgca caccaaaaac ccatcacagc
2701 cctgaaagcc gctgctgggc gcttggtgac tgggagccaa gaccacacac tgagagtgtt
2761 ccgtctggag gactcgtgct gcctcttcac ccttcagggc cactcagggg ccatcacgac
2821 cgtgtacatt gaccagacca tggtgctggc cagtggagga caagatgggg ccatctgcct
2881 gtgggatgta ctgactggca gccgggtcag ccatgtgttt gctcaccgtg gggatgtcac
2941 ctcccttacc tgtaccacct cctgtgtcat cagcagtggc ctggatgacc tcatcagcat
3001 ctgggaccgc agcacaggca tcaagttcta ctccattcag caggacctgg gctgtggtgc
3061 aagcttgggt gtcatctcag acaacctgct ggtgactggc ggccagggct gtgtctcctt
3121 ttgggaccta aactacgggg acctgttaca gacagtctac ctggggaaga acagtgaggc
3181 ccagcctgcc cgccagatcc tggtgctgga caacgctgcc attgtctgca actttggcag
3241 tgagctcagc ctggtgtatg tgccctctgt gctggagaag ctggactgag cgcagggcct
3301 ccttgcccag gcaggaggct ggggtgctgt gtgggggcca atgcactgaa cctggacttg
3361 ggggaaagag ccgagtatct tccagccgct gcctcctgac tgtaataata ttaaactttt
3421 ttaaaaaacc at
//