LOCUS AK291481 3123 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78175 complete cds, highly similar to Homo
sapiens PDZ domain containing 6 (PDZK6), mRNA.
ACCESSION AK291481
VERSION AK291481.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3123)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3123
/clone="OCBBF3026764"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424278"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 86..2914
/codon_start=1
/note="highly similar to Homo sapiens PDZ domain
containing 6 (PDZK6), mRNA"
/protein_id="BAF84170.1"
/transl_table=1
/translation="MASVASCDSRPSSDELPGDPSSQEEDEDYDFEDRVSDSGSYSSA
SSDYDDLEPEWLDSVQKNGELFYLELSEDEEESLLPETPTVNHVRFSENEIIIEDDYK
ERKKYEPKLKQFTKILRRKRLLPKRCNKKNSNDNGPVSILKHQSNQKTGVIVQQRYKD
VNVYVNPKKLTVIKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGDGERLVVHGLLPGGS
AMKSGQVLIGDVLVAVNDVDVTTENIERVLSCIPGPMQVKLTFENAYDVKRETSHPRQ
KKTQSNTSDLVKLLWGEEVEGIQQSGLNTPHIIMYLTLQLDSETSKEEQEILYHYPMS
EASQKLKSVRGIFLTLCDMLENVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPA
EEVPLPRLRNMIENVIQTLKFMYGSLDSAFCQIENVPRLDHFFNLFFQRALQPAKLHS
SASPSAQQYDASSAVLLDNLPGVRWLTLPLEIKMELDMALSDLEAADFAELSEDYYDM
RRLYTILGSSLFYKGYLICSHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLIIWREVF
PQHHLRPLADSSTEVFPEPEGRYFLLVVGLKHYMLCVLLEAGGCASKAIGSPGPDCVY
VDQVKTTLHQLDGVDSRIDERLASSPVPCLSCADWFLTGSREKTDSLTTSPILSRLQG
TSKVATSPTCRRTLFGDYSLKTRKPSPSCSSGGSDNGCEGGEDDGFSPHTTPDAVRKQ
RESQGSDGLEESGTLLKVTKKKSTLPNPFHLGNLKKDLPEKELEIYNTVKLTSGPENT
LFHYVALETVQGIFITPTLEEVAQLSGSIHPQLIKNFHQCCLSIRAVFQQTLVEEKKK
GLNSGDHSDSAKSVSSLNPVKEHGVLFECSPGNWTDQKKAPPVMAYWVVGRLFLHPKP
QELYVCFHDSVTEIAIEIAFKLFFGLTL"
BASE COUNT 939 a 622 c 693 g 869 t
ORIGIN
1 cccaagcaga ggcaacatgg cggccttagc aagctatagc tgcgagattt gaattactcc
61 actcgtagct attgcattcc tgacgatggc ctctgtggct tcgtgcgatt cgcgtccgag
121 ctcagacgag ctccctggag acccctcttc acaagaagaa gatgaggact atgattttga
181 agatcgggtc agcgactcgg gttcatattc ctcagcgagt agcgattatg atgatcttga
241 gcctgaatgg ctggacagtg tgcagaaaaa tggagagctg ttttatttgg aattgagtga
301 ggatgaagaa gaaagcctcc ttcctgagac accaactgtg aaccatgtca ggttcagtga
361 aaatgagatt atcattgaag atgactacaa agaaagaaaa aagtatgaac ccaaactcaa
421 gcagtttacc aaaattttaa gaaggaaaag acttttaccc aagcgctgca ataaaaaaaa
481 tagcaatgac aatggaccag tatccattct aaagcatcag tccaatcaga agacaggagt
541 cattgtccaa cagcgataca aagatgtgaa tgtttatgta aaccccaaaa agctaactgt
601 tatcaaagcc aaagagcagc tcaagcttct ggaagtgctg gttggaatta ttcatcagac
661 caagtggagc tggagaagaa ccggaaagca gggtgatgga gagaggcttg tggttcatgg
721 cctgctgcca gggggatctg ctatgaagag cggtcaggta ctcattggtg atgtccttgt
781 tgctgtgaat gatgtcgatg ttactactga aaacatcgag agagttctgt cttgcattcc
841 tggacctatg caggtgaaac tgacatttga aaatgcatat gatgtgaaaa gggagacgtc
901 ccatccaaga cagaaaaaga cacagtccaa cacaagtgat ttagtcaagc ttctctgggg
961 agaagaggtt gaaggtatcc agcagagtgg cctaaacact cctcatatca ttatgtatct
1021 cacactacag ctcgactcag aaacctcaaa ggaagagcag gaaattcttt atcattatcc
1081 aatgtctgaa gcatctcaga aacttaaaag tgtgagaggg atttttctca cactctgtga
1141 catgctggaa aacgtaactg ggacacaagt tactagttca tccctccttt taaatggaaa
1201 acaaattcat gtggcttatt ggaaagaatc tgacaagttg ttgctaattg gcctgcctgc
1261 tgaagaagtt cctcttcctc gtctaaggaa catgatagaa aatgtcatcc aaaccttaaa
1321 atttatgtat ggttctttag atagtgcctt ttgccagatt gagaatgttc ctcgtttgga
1381 tcattttttt aacttgttct ttcaaagagc acttcagcct gcgaaactgc attccagcgc
1441 cagtcccagt gctcagcagt acgatgcttc cagtgcagta cttttagaca acctccctgg
1501 agtccggtgg ctcacacttc cactggaaat caagatggaa ttagacatgg cattaagtga
1561 cttggaggct gcagattttg cagaactgtc cgaggattac tatgacatga ggcggctgta
1621 tacaattttg gggtcttctc tattttacaa gggttatttg atatgcagtc atttgcccaa
1681 ggatgatctt attgatattg ccgtatactg tcgccactat tgcctgctgc ctttagcagc
1741 aaaacaaaga attggtcagt tgatcatatg gagagaagtg tttcctcagc atcacctccg
1801 acctttggca gactcaagca ctgaagtctt tccggaacct gaaggaagat attttttgct
1861 agttgttggc ttgaaacatt atatgctatg tgtactatta gaagctggag gttgcgcatc
1921 caaagctatt gggagtcctg gaccagactg tgtatatgtg gatcaagtca aaacaactct
1981 tcaccagctg gatggagtag attctcgcat agatgaacgg ctagcatctt ctccagtccc
2041 ctgtttgtct tgtgctgact ggttccttac tggatcacgt gaaaaaacag atagcttgac
2101 cacttcgcct attctcagta ggctacaagg tacttccaaa gtagcaactt ctccaacatg
2161 cagaagaacg ctttttggtg actattccct aaagacacgc aagcctagtc cttcctgtag
2221 tagtggagga tctgacaatg gttgtgaagg tggagaagat gatggcttta gcccccatac
2281 tacaccggat gcagtacgga agcaaagaga atctcagggc tctgatggtt tagaagaaag
2341 tgggaccttg cttaaggtca ctaaaaagaa gtctactctt ccaaatccat ttcatttggg
2401 aaacttgaaa aaggaccttc cagaaaaaga attagaaata tataacacag tgaaactgac
2461 atctggtcct gagaacacac ttttccacta cgttgcctta gaaacagtgc aaggaatctt
2521 tattactcct acccttgaag aggtggcaca gctaagtggc tctatccacc ctcagctaat
2581 aaagaatttc catcagtgtt gtctttccat tcgtgcagtt ttccaacaga cattggtgga
2641 agagaaaaag aaaggactaa atagtggaga ccattcagat tctgcaaagt cagtgtcttc
2701 tcttaaccct gttaaagaac atggtgtgtt gtttgaatgt tcacctggaa actggactga
2761 tcagaaaaaa gcaccaccag ttatggctta ctgggtagta gggagacttt ttcttcatcc
2821 aaaacctcaa gaactttatg tctgttttca tgactcagtc acagaaattg ccattgaaat
2881 agcttttaaa ttgttctttg ggttaacctt gtagctgtgc tttcttgatg cgtagaaaca
2941 cgtgcatgga ggatcaaaca ctgtcagaat tgctgaaatc aatacacaaa gagataaagt
3001 ttagcttctt tttactattc aatattgaac ataatattgt taaatattga gatgaaatgc
3061 tgttggattt gatacattaa atcttaatgt aatattgtaa gacttttgag aatatacttg
3121 att
//