LOCUS AK291468 1574 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75870 complete cds, highly similar to Homo
sapiens neuro-oncological ventral antigen 1 (NOVA1), transcript
variant 1, mRNA.
ACCESSION AK291468
VERSION AK291468.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1574)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1574
/clone="OCBBF3023657"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424265"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 20..1543
/codon_start=1
/note="highly similar to Homo sapiens neuro-oncological
ventral antigen 1 (NOVA1), transcript variant 1, mRNA"
/protein_id="BAF84157.1"
/transl_table=1
/translation="MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNT
GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI
QGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKS
SPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQE
RVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTA
EVLPTAAAAAGLLGHANLAGFAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGL
GLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAAT
AATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQEL
TGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG"
BASE COUNT 461 a 389 c 388 g 336 t
ORIGIN
1 agcggcagga actgcaaaca tgatggcggc agctcccatc cagcagaacg ggacccacac
61 tggggttccc atagacctgg acccgccgga ctcgcggaaa aggccgctgg aagccccccc
121 tgaagccggc agcaccaaga ggaccaatac gggcgaagac ggccagtatt ttctaaaggt
181 tctcatacct agttatgctg ctggatctat aattgggaag ggaggacaga caattgttca
241 gttgcaaaaa gaaactggag ccaccatcaa gctgtctaag tccaaagatt tttacccagg
301 tactactgag cgagtgtgct tgatccaggg aacggttgaa gcactgaatg cagttcatgg
361 attcattgca gaaaaaattc gagaaatgcc ccaaaatgtg gccaagacag aaccagtcag
421 cattctacaa ccccagacca ccgttaatcc agatcgcatc aaacaaacat tgccatcttc
481 cccaactacc accaagtcct ctccatctga tcccatgacc acctccagag ctaatcaggt
541 aaagattata gttcccaaca gcacagcagg tctgataata gggaagggag gtgctactgt
601 gaaggctgta atggagcagt cgggggcttg ggtgcagctt tcccagaaac ctgatgggat
661 caacttgcaa gagagggttg tcactgtgag tggagaacct gaacaaaacc gaaaagctgt
721 tgaacttatc atccagaaga tacaagagga tccacaaagc ggcagctgtc tcaatatcag
781 ttatgccaat gtgacaggtc cagtggcaaa ttccaatcca accggatctc cttatgcaaa
841 cactgctgaa gtgttaccaa ctgctgcagc agctgcaggg ctattaggac atgctaacct
901 tgctggcttt gcagcctttc cagcagtttt atctggcttc acaggcaatg acctggtggc
961 catcacctct gcacttaata cattagccag ctatggatat aatctcaaca ctttaggttt
1021 aggtctcagt caagcagcag caacaggggc tttggctgca gcagctgcca gtgccaaccc
1081 agcagcagca gcagccaatt tattggccac ctatgccagt gaagcctcag ccagtggcag
1141 cacagctggt ggtacggcgg ggacatttgc attaggtagc ctggctgctg ctactgctgc
1201 aaccaatgga tattttggag ctgcttctcc cctagctgcc agtgccattc taggaacaga
1261 aaagtccaca gatggatcca aggatgtagt tgaaatagca gtgccagaaa acttagttgg
1321 tgcaatactt ggcaaaggag ggaaaacatt agtggaatac caggagttga ctggtgcaag
1381 gatacagatc tccaaaaaag gagaattcgt acctggcaca aggaatcgga aggtaaccat
1441 tactggaaca ccagctgcaa cacaggctgc tcaatattta attacacaaa ggatcacata
1501 tgagcaagga gttcgggctg ccaatcctca gaaagtgggt tgagtgcccc agttacacat
1561 cagattgttt taac
//