LOCUS AK291452 3810 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78655 complete cds, highly similar to Homo
sapiens exportin 5 (XPO5), mRNA.
ACCESSION AK291452
VERSION AK291452.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3810)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3810
/clone="OCBBF3020115"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424249"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 175..3789
/codon_start=1
/note="highly similar to Homo sapiens exportin 5 (XPO5),
mRNA"
/protein_id="BAF84141.1"
/transl_table=1
/translation="MAMDQVNALCEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKC
PICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGT
LNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRL
AEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQ
ANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVS
RKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLC
ALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLA
IIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLA
CRLDPKTSFQMAGEWLKYQLSTFLDAGSVNSCSAVGTGEGSLCSVFSPSFVQWEAMTL
FLESVITQMFRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYR
PEFLPQVFSKLFSSVTFETVEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFD
MLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFKNYERQKVFLEELMAPVASIWLS
QDMHRVLSDVDAFIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTD
LEEAKAGGFVVGYTSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEP
FTKALDMLDAEKSAILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGP
SMQQDFYTVEDLATQLLSSAFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSP
ILGPLFTYLHMRLSQKWQVINQRSLLCGEDEAADENPESQEMLEEQLVRMLTREVMDL
ITVCCVSKKGADHSSAPPADGDDEEMMATKVTPSAMAELTDLGKCLMKHEDVCTALLI
TAFNSLAWKDTLSCQRTTSQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQMHGQHDG
CMASLVHLAFQIYEALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRR
KDQFKRLIAGCIGKPLGEQFRKEVHIKNLPSLFKKTKPMLETEVLDNDGGGLATIFEP
"
BASE COUNT 978 a 922 c 932 g 978 t
ORIGIN
1 gtgcgcagcg ccggcttctt cccagcgcga gttgctgcta acgctcctcc tccagcttcc
61 cacccccgcc gcccgccgcg gcccggtacc aacgggtggt ctcgccgagg gagctgtcgt
121 gcctcgtggt cccgggactg cagtggtgtg cgctctcggc gcgtggcgct aggcatggcg
181 atggatcaag taaacgcgct gtgcgagcag ctggtgaaag cggtgacggt catgatggac
241 cccaactcca cccagcgcta ccggctggaa gccctcaagt tttgtgagga gtttaaagaa
301 aagtgtccta tctgtgtccc ctgtggcttg aggttggctg agaaaacaca agttgccatc
361 gtcagacatt ttggccttca gatcctggaa cacgttgtca agtttcggtg gaacggcatg
421 tctcgattgg agaaggtgta tctgaagaac agtgtcatgg agctgattgc aaatggaaca
481 ttgaacattt tggaagagga gaaccatatt aaagatgctc tgtctcgaat tgtagtggaa
541 atgatcaagc gagagtggcc acagcattgg cctgacatgc taatagaatt ggacactctt
601 tccaaacaag gggaaacaca gacagaattg gtgatgttta tccttttgcg actggcagag
661 gatgtagtga cttttcagac acttccccct caaagaagaa gggacatcca gcaaacatta
721 acccagaaca tggaaaggat cttcagtttt ctgcttaaca cacttcaaga aaatgtaaac
781 aagtatcagc aagtgaagac agatacttct caggagtcaa aggcgcaagc aaactgtcga
841 gtaggagttg cagcactgaa tactctagca ggctatattg actgggtgtc tatgagtcac
901 atcactgctg aaaactgtaa actcctggag atactgtgtt tgctgttgaa tgaacaggaa
961 cttcagttgg gagccgctga gtgtcttctc attgcagtca gcagaaaagg caagttggaa
1021 gaccggaagc ccttgatggt cttatttgga gatgttgcca tgcattatat actctccgcc
1081 gcacagactg ctgatggagg aggtttggta gaaaaacact acgtctttct gaagaggctc
1141 tgtcaggtgt tgtgtgcgct gggcaatcag ctgtgtgcat tgctgggtgc agattctgat
1201 gtagaaacac catcaaactt tggaaaatac ctggaatctt ttcttgcttt cacaacccat
1261 ccaagtcagt ttctacgctc ttcaactcag atgacttggg gagccctctt caggcatgaa
1321 atcctgtccc gtgatccttt gctattagca ataataccaa aatatcttcg tgcttccatg
1381 actaacttgg tcaagatggg ctttccttct aaaacagaca gccctagctg tgaatattct
1441 cggtttgatt ttgatagcga tgaggacttc aatgctttct tcaactcctc ccgagcacaa
1501 caaggagagg tgatgaggtt ggcatgtcgt ttggatccca aaactagctt ccagatggct
1561 ggggagtggc taaagtatca actatcaact tttcttgatg ctggttctgt gaattcttgt
1621 tctgcagttg gaactggaga aggaagcctc tgttccgtct tctcaccttc attcgtgcag
1681 tgggaagcca tgactctttt tttggaaagt gttatcaccc agatgtttcg aacactaaat
1741 agagaagaaa ttcctgttaa tgatggaata gagctattgc agatggttct gaactttgat
1801 accaaggatc ccctcatcct gtcctgcgtc cttactaatg tctctgcact ctttccattt
1861 gtcacctaca gaccagagtt cctgccccag gtcttctcta agctattttc atctgtcact
1921 tttgaaactg ttgaagaaag taaggccccc agaacccggg cagtgaggaa tgtgaggagg
1981 catgcttgtt cctccatcat caagatgtgt cgtgactacc cccagcttgt gctgcccaat
2041 tttgacatgc tttataacca tgtgaagcaa ctcctctcca atgagctact cctgacacaa
2101 atggagaagt gtgccctcat ggaagccctg gttctcatta gcaaccaatt taagaactac
2161 gagcgtcaga aggtgttcct agaggagctg atggcaccag tggccagcat ctggctttct
2221 caagacatgc acagagtgct gtcagatgtt gatgctttca ttgcgtatgt gggtacagat
2281 cagaagagct gtgacccagg cctggaggat ccgtgtggct taaaccgtgc acgaatgagc
2341 ttttgtgtat acagcattct gggtgtggtg aaacgaactt gctggcccac tgacctagaa
2401 gaggccaaag ctgggggatt tgtggtgggt tatacatcca gtggaaatcc aatcttccgt
2461 aacccctgca cagagcagat tctgaaactt cttgacaatt tgcttgcgct tataagaacc
2521 cacaatacat tatatgcacc agaaatgcta gccaaaatgg cagagccttt caccaaggct
2581 ctggatatgc ttgacgcgga aaaatctgct atattaggat tacctcaacc tctcttggaa
2641 ctcaatgact ctcctgtctt caaaaccgtc ttggaaagaa tgcagcgttt cttctctacc
2701 ctctatgaaa actgttttca tatcctaggg aaggcaggcc cttccatgca gcaagacttc
2761 tatactgtgg aggaccttgc tacccagctt ctcagctcag cctttgtcaa cttgaacaat
2821 attcctgact accgactcag acccatgctt cgtgtctttg taaagcctct ggtgctcttc
2881 tgtcccccag agcactatga agccctggta tcccccatcc tcggacctct tttcacctac
2941 ctccatatga ggctttctca gaaatggcaa gttatcaacc aaaggagcct gctgtgtgga
3001 gaagatgagg ctgcagatga aaacccagag tctcaagaga tgctggagga gcaactggtg
3061 aggatgttaa cccgagaagt catggaccta atcacggttt gctgtgtttc aaagaagggt
3121 gctgaccaca gtagtgctcc cccagcagat ggagacgatg aagaaatgat ggccacaaag
3181 gtcaccccct cagctatggc agagcttaca gacctgggca aatgtctgat gaagcatgag
3241 gatgtttgta cagcgctatt aattacagcc ttcaattccc tggcctggaa agatactctg
3301 tcctgccaga ggacaacctc acagctctgc tggcctctcc tcaaacaagt gctgtcaggg
3361 acactgctcg cagatgcagt tacgtggctt ttcaccagtg tgctgaaagg cttacagatg
3421 cacgggcagc acgacgggtg catggcttcc ctggtccatc tggccttcca gatatacgag
3481 gcactgcgcc ccaggtacct ggagataaga gctgtaatgg agcaaatccc tgaaatacag
3541 aaggactcac tggaccagtt tgactgcaag cttttaaacc cctccctgca gaaagtggct
3601 gacaagcgcc gaaaggacca attcaaacgc ctcattgctg gttgcattgg gaaacccttg
3661 ggagagcagt tccgaaaaga agttcacatt aagaatcttc cctcactttt caaaaaaaca
3721 aagccaatgc tggagacgga ggtgctggac aatgatgggg gtggcctggc caccatcttt
3781 gaaccctgaa tcaagctttt gggcatcctt
//