LOCUS AK291412 1758 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76301 complete cds, highly similar to Homo
sapiens Rho guanine nucleotide exchange factor (GEF) 3 (ARHGEF3),
mRNA.
ACCESSION AK291412
VERSION AK291412.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1758)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1758
/clone="OCBBF3000593"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424209"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 152..1732
/codon_start=1
/note="highly similar to Homo sapiens Rho guanine
nucleotide exchange factor (GEF) 3 (ARHGEF3), mRNA"
/protein_id="BAF84101.1"
/transl_table=1
/translation="MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSR
VTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK
LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTE
QELNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQ
VAAKALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRH
TPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRV
VCCHGELKNNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDG
EVRLGGSLRGAFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKET
VLCAAGQAGVLDSEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCER
MEQTDSSCGNSRHGESNV"
BASE COUNT 473 a 476 c 444 g 365 t
ORIGIN
1 agtcgagtcc tgcccggcta gaagccggct gtcggtctcc gtgtcgccgc cgccgcccgg
61 catcgtggag ctggggcccc cttttgcctg ggagttttgt agtcgcctag ggtcagcggt
121 gacatcccaa agggcaggcc cggcagccgc catggtggcc aaggattacc ccttctacct
181 cacggtcaag agagcgaact gcagcctgga gctacccccg gccagcggtc cggccaagga
241 cgctgaggag cctagtaata aacgggtcaa acccctttcc cgagtcacgt cgctagcaaa
301 cctcatcccg cccgtgaagg ccacgccatt aaagcgcttc agtcaaaccc tgcagcgctc
361 cattagcttc cgcagtgaga gccgccctga catcctcgcc ccccgaccct ggtccagaaa
421 tgccgccccc tcgagcacga aacggagaga tagcaagctg tggagtgaga ccttcgatgt
481 gtgcgtcaat cagatgctta catccaagga aatcaaacgt caggaggcga tctttgagct
541 ttcccaagga gaagaagact tgatagaaga cttgaaatta gcaaaaaagg cctatcatga
601 ccccatgctg aaactctcca taatgacaga acaagagttg aatcaaattt ttggaacact
661 ggactctcta attcctctac atgaagagct ccttagtcag cttcgagatg ttaggaagcc
721 tgatggctcg actgaacatg ttggtcccat cctcgtgggc tggctccctt gcctcagctc
781 ctatgatagc tactgcagca atcaagtagc cgccaaagct ctgctggacc acaaaaagca
841 agatcaccga gtccaggatt tcctacagcg atgtttagaa tcccccttta gccgcaaact
901 agatctctgg aatttcctcg atattccaag aagccgcctg gtaaaatacc ctctgcttct
961 ccgagaaatc ttgaggcaca caccaaatga taatccagat cagcagcact tggaagaagc
1021 tataaatatc attcagggaa ttgtggcaga aatcaacacc aagactggtg aatctgaatg
1081 ccgctattat aaagagcggc ttctttactt ggaagaaggc cagaaagact ccctgatcga
1141 cagctctcga gtcgtgtgtt gtcatggtga actgaagaac aatcggggcg tgaaactgca
1201 tgttttcctg ttccaagaag tgcttgtgat cactcgagcc gtcacccaca atgagcagct
1261 ttgctaccag ctgtaccgtc agccaatccc cgtgaaagac ctcctgctgg aagacctcca
1321 ggatggagaa gtgaggctgg gtggctccct gcgaggggca ttcagcaaca atgagagaat
1381 taaaaacttc ttcagagtca gtttcaaaaa tggatcccaa agtcagaccc actcgctaca
1441 agccaatgac actttcaaca aacagcagtg gcttaactgt attcgtcaag ccaaagaaac
1501 agttttgtgt gctgccgggc aagctggggt gcttgactcc gagggatcgt tcctaaatcc
1561 caccaccggg agcagagagc tacagggaga aacaaaactt gagcagatgg accaatcgga
1621 cagtgagtca gactgtagta tggacacgag tgaggtcagc ctcgactgtg agcgcatgga
1681 acagacagac tcttcctgtg ggaacagcag gcatggtgaa agtaacgtct gacagaagca
1741 tgtgcacttc gggaagca
//