LOCUS AK291411 3207 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77258 complete cds, highly similar to Homo
sapiens EPH receptor A3 (EPHA3), transcript variant 1, mRNA.
ACCESSION AK291411
VERSION AK291411.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3207)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3207
/clone="OCBBF3000397"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000424208"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 59..3010
/codon_start=1
/note="highly similar to Homo sapiens EPH receptor A3
(EPHA3), transcript variant 1, mRNA"
/protein_id="BAF84100.1"
/transl_table=1
/translation="MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGW
ISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFT
LRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDR
ILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPM
DSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPG
FYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVIS
NINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNT
TVTVTDLLAHTNYTFEIDAVNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSR
NSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTIYVFQ
IRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVMIAISAAVAIILLTVVIYVLIGR
FCGYKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISID
KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI
IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM
GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY
RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL
MLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR
TTGDWLNGVWTAHCKEIFTGVEYSSCDTIAKISTDDMKRVGVTVVGPQKKIISSIKAL
ETQSKNGPVPV"
BASE COUNT 914 a 711 c 782 g 800 t
ORIGIN
1 acatcagtgg catgcttcat ggagatatgc tcctctcact gccctctgca ccagcaacat
61 ggattgtcag ctctccatcc tcctccttct cagctgctct gttctcgaca gcttcgggga
121 actgattccg cagccttcca atgaagtcaa tctactggat tcaaaaacaa ttcaagggga
181 gctgggctgg atctcttatc catcacatgg gtgggaagag atcagtggtg tggatgaaca
241 ttacacaccc atcaggactt accaggtgtg caatgtcatg gaccacagtc aaaacaattg
301 gctgagaaca aactgggtcc ccaggaactc agctcagaag atttatgtgg agctcaagtt
361 cactctacga gactgcaata gcattccatt ggttttagga acttgcaagg agacattcaa
421 cctgtactac atggagtctg atgatgatca tggggtgaaa tttcgagagc atcagtttac
481 aaagattgac accattgcag ctgatgaaag tttcactcaa atggatcttg gggaccgtat
541 tctgaagctc aacactgaga ttagagaagt aggtcctgtc aacaagaagg gattttattt
601 ggcatttcaa gatgttggtg cttgtgttgc cttggtgtct gtgagagtat acttcaaaaa
661 gtgcccattt acagtgaaga atctggctat gtttccagac acggtaccca tggactccca
721 gtccctggtg gaggttagag ggtcttgtgt caacaattct aaggaggaag atcctccaag
781 gatgtactgc agtacagaag gcgaatggct tgtacccatt ggcaagtgtt cctgcaatgc
841 tggctatgaa gaaagaggtt ttatgtgcca agcttgtcga ccaggtttct acaaggcatt
901 ggatggtaat atgaagtgtg ctaagtgccc gcctcacagt tctactcagg aagatggttc
961 aatgaactgc aggtgtgaga ataattactt ccgggcagac aaagaccctc catccatggc
1021 ttgtacccga cctccatctt caccaagaaa tgtcatctct aatataaacg agacctcagt
1081 tatcctggac tggagttggc ccctggacac aggaggccgg aaagatgtta ccttcaacat
1141 catatgtaaa aaatgtgggt ggaatataaa acagtgtgag ccatgcagcc caaatgtccg
1201 cttcctccct cgacagtttg gactcaccaa caccacggtg acagtgacag accttctggc
1261 acatactaac tacacctttg agattgatgc cgttaatggg gtgtcagagc tgagctcccc
1321 accaagacag tttgctgcgg tcagcatcac aactaatcag gctgctccat cacctgtcct
1381 gacgattaag aaagatcgga cctccagaaa tagcatctct ttgtcctggc aagaacctga
1441 acatcctaat gggatcatat tggactacga ggtcaaatac tatgaaaagc aggaacaaga
1501 aacaagttat accattctga gggcaagagg cacaaatgtt accatcagta gcctcaagcc
1561 tgacactata tacgtattcc aaatccgagc ccgaacagcc gctggatatg ggacgaacag
1621 ccgcaagttt gagtttgaaa ctagtccaga ctctttctcc atctctggtg aaagtagcca
1681 agtggtcatg atcgccattt cagcggcagt agcaattatt ctcctcactg ttgtcatcta
1741 tgttttgatt gggaggttct gtggctataa gtcaaaacat ggggcagatg aaaaaagact
1801 tcattttggc aatgggcatt taaaacttcc aggtctcagg acttatgttg acccacatac
1861 atatgaagac cctacccaag ctgttcatga gtttgccaag gaattggatg ccaccaacat
1921 atccattgat aaagttgttg gagcaggtga atttggagag gtgtgcagtg gtcgcttaaa
1981 acttccttca aaaaaagaga tttcagtggc cattaagacc ctgaaagttg gctacacaga
2041 aaagcagagg agagacttcc tgggagaagc aagcattatg ggacagtttg accaccccaa
2101 tatcattcga ctggaaggag ttgttaccaa aagtaagcca gttatgattg tcacagaata
2161 catggagaat ggttccttgg atagtttcct acgtaaacac gatgcccagt ttactgtcat
2221 tcagctagtg gggatgcttc gagggatagc atctggcatg aagtacctgt cagacatggg
2281 ctatgttcac cgagacctcg ctgctcggaa catcttgatc aacagtaact tggtgtgtaa
2341 ggtttctgat ttcggacttt cgcgtgtcct ggaggatgac ccagaagctg cttatacaac
2401 aagaggaggg aagatcccaa tcaggtggac atcaccagaa gctatagcct accgcaagtt
2461 cacgtcagcc agcgatgtat ggagttatgg gattgttctc tgggaggtga tgtcttatgg
2521 agagagacca tactgggaga tgtccaatca ggatgtaatt aaagctgtag atgagggcta
2581 tcgactgcca ccccccatgg actgcccagc tgccttgtat cagctgatgc tggactgctg
2641 gcagaaagac aggaacaaca gacccaagtt tgagcagatt gttagtattc tggacaagct
2701 tatccggaat cccggcagcc tgaagatcat caccagtgca gccgcaaggc catcaaacct
2761 tcttctggac caaagcaatg tggatatcac taccttccgc acaacaggtg actggcttaa
2821 tggtgtctgg acagcacact gcaaggaaat cttcacgggt gtggagtaca gttcttgtga
2881 cacaatagcc aagatttcca cagatgacat gaaaagggtt ggtgtcaccg tggttgggcc
2941 acagaagaag atcatcagta gcattaaagc tctagaaacg caatcaaaga atggcccagt
3001 tcccgtgtaa agcacgggac ggaagtgctt ctggacggaa gtggtggctg tggaaggcgt
3061 agcatcatcc tgcagacaga caataattct ggagatactg gtggaagttc caagtccaat
3121 aagacactca aatatgagta caaatgcctt aaaatggaat tgaaaaactc tttattttcc
3181 cctatcattt attggatggg tgggtgg
//