LOCUS AK291405 2767 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77551 complete cds, highly similar to Homo
sapiens ubiquitin protein ligase E3A (human papilloma virus
E6-associated protein, Angelman syndrome) (UBE3A), transcript
variant 1, mRNA.
ACCESSION AK291405
VERSION AK291405.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2767)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2767
/clone="OCBBF2037868"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000424202"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 191..2749
/codon_start=1
/note="highly similar to Homo sapiens ubiquitin protein
ligase E3A (human papilloma virus E6-associated protein,
Angelman syndrome) (UBE3A), transcript variant 1, mRNA"
/protein_id="BAF84094.1"
/transl_table=1
/translation="MKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLRMDNNA
AAIKALELYKINAKLCDPHPSKKGASSAYLENSKGAPNNSCSEIKMNKKGARIDFKDV
TYLTEEKVYEILELCREREDYSPLIRVIGRVFSSAEALVQSFRKVKQHTKEELKSLQA
KDEDKDEDEKEKAACSAAAMEEDSEASSSRIGDSSQGDNNLQKLGPDDVSVDIDAIRR
VYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSP
EYLEMALPLFCKAMSKLPLAAQGKLIRLWSKYNADQIRRMMETFQQLITYKVISNEFN
SRNLVNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGE
ERRNKKGPRVDPLETELGVKTLDCRKPLIPFEEFINEPLNEVLEMDKDYTFFKVETEN
KFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDH
IIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGM
FTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT
FRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPI
TNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSR
NLDFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLG
KLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML"
BASE COUNT 917 a 485 c 607 g 758 t
ORIGIN
1 acagtatgac atctgatgct ggagggtcgc actttcacaa atgagtcagc tggtacatgg
61 ggttatcatc aatttttagc tcttctgtct gggagataca agtttggaag caatcttggg
121 gtacttaccc acaaggctgg tggagaccag atcaggagaa cctcagtctg acgacattga
181 agctagccga atgaagcgag cagctgcaaa gcatctaata gaacgctact accaccagtt
241 aactgagggc tgtggaaatg aagcctgcac gaatgagttt tgtgcttcct gtccaacttt
301 tcttcgtatg gataataatg cagcagctat taaagccctc gagctttata agattaatgc
361 aaaactctgt gatcctcatc cctccaagaa aggagcaagc tcagcttacc ttgagaactc
421 gaaaggtgcc cccaacaact cctgctctga gataaaaatg aacaagaaag gcgctagaat
481 tgattttaaa gatgtgactt acttaacaga agagaaggta tatgaaattc ttgaattatg
541 tagagaaaga gaggattatt cccctttaat ccgtgttatt ggaagagttt tttctagtgc
601 tgaggcattg gtacagagct tccggaaagt taaacaacac accaaggaag aactgaaatc
661 tcttcaagca aaagatgaag acaaagatga ggatgaaaag gaaaaagctg catgttctgc
721 tgctgctatg gaagaagact cagaagcatc ttcctcaagg ataggtgata gctcacaggg
781 agacaacaat ttgcaaaaat taggccctga tgatgtgtct gtggatattg atgccattag
841 aagggtctac accagattgc tctctaatga aaaaattgaa actgcctttc tcaatgcact
901 tgtatatttg tcacctaacg tggaatgtga cttgacgtat cacaatgtat actctcgaga
961 tcctaattat ctgaatttgt tcattatcgt aatggagaat agaaatctcc acagtcctga
1021 atatctggaa atggctttgc cattattttg caaagcgatg agcaagctac cccttgcagc
1081 ccaaggaaaa ctgatcagac tgtggtctaa atacaatgca gaccagattc ggagaatgat
1141 ggagacattt cagcaactta ttacttataa agtcataagc aatgaattta acagtcgaaa
1201 tctagtgaat gatgatgatg ccattgttgc tgcttcgaag tgcttgaaaa tggtttacta
1261 tgcaaatgta gtgggagggg aagtggacac aaatcacaat gaagaagatg atgaagagcc
1321 catccctgag tccagcgagc tgacacttca ggaacttttg ggagaagaaa gaagaaacaa
1381 gaaaggtcct cgagtggacc ccctggaaac tgaacttggt gttaaaaccc tggattgtcg
1441 aaaaccactt atcccttttg aagagtttat taatgaacca ctgaatgagg ttctagaaat
1501 ggataaagat tatacttttt tcaaagtaga aacagagaac aaattctctt ttatgacatg
1561 tccctttata ttgaatgctg tcacaaagaa tttgggatta tattatgaca atagaattcg
1621 catgtacagt gaacgaagaa tcactgttct ctacagctta gttcaaggac agcagttgaa
1681 tccatatttg agactcaaag ttagacgtga ccatatcata gatgatgcac ttgtccggct
1741 agagatgatc gctatggaaa atcctgcaga cttgaagaag cagttgtatg tggaatttga
1801 aggagaacaa ggagttgatg agggaggtgt ttccaaagaa ttttttcagc tggttgtgga
1861 ggaaatcttc aatccagata ttggtatgtt cacatacgat gaatctacaa aattgttttg
1921 gtttaatcca tcttcttttg aaactgaggg tcagtttact ctgattggca tagtactggg
1981 tctggctatt tacaataact gtatactgga tgtacatttt cccatggttg tctacaggaa
2041 gctaatgggg aaaaaaggaa cttttcgtga cttgggagac tctcacccag ttctatatca
2101 gagtttaaaa gatttattgg agtatgaagg gaatgtggaa gatgacatga tgatcacttt
2161 ccagatatca cagacagatc tttttggtaa cccaatgatg tatgatctaa aggaaaatgg
2221 tgataaaatt ccaattacaa atgaaaacag gaaggaattt gtcaatcttt attctgacta
2281 cattctcaat aaatcagtag aaaaacagtt caaggctttt cggagaggtt ttcatatggt
2341 gaccaatgaa tctcccttaa agtacttatt cagaccagaa gaaattgaat tgcttatatg
2401 tggaagccgg aatctagatt tccaagcact agaagaaact acagaatatg acggtggcta
2461 taccagggac tctgttctga ttagggagtt ctgggaaatc gttcattcat ttacagatga
2521 acagaaaaga ctcttcttgc agtttacaac gggcacagac agagcacctg tgggaggact
2581 aggaaaatta aagatgatta tagccaaaaa tggcccagac acagaaaggt tacctacatc
2641 tcatacttgc tttaatgtgc ttttacttcc ggaatactca agcaaagaaa aacttaaaga
2701 gagattgttg aaggccatca cgtatgccaa aggatttggc atgctgtaaa acaaaacaaa
2761 acaaaat
//