LOCUS AK291386 2875 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78650 complete cds, highly similar to Homo
sapiens mucosa associated lymphoid tissue lymphoma translocation
gene 1 (MALT1), transcript variant 1, mRNA.
ACCESSION AK291386
VERSION AK291386.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2875)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2875
/clone="OCBBF2021746"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000424183"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 225..2699
/codon_start=1
/note="highly similar to Homo sapiens mucosa associated
lymphoid tissue lymphoma translocation gene 1 (MALT1),
transcript variant 1, mRNA"
/protein_id="BAF84075.1"
/transl_table=1
/translation="MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSEL
LDQAPEGRGWRRLAELAGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCT
VTELSDFLQAMEHTEVLQLLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQW
FKMNKEIPNGNTSELIFNAVHVKDAGFYVCRANNNFTFEFSQWSQLDVCDIPESFQRS
VDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYM
VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIGRTDEAVECTEDELNNLGHPDNKEQT
TDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFKVVSLLDLTEYEMR
NAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQ
EKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSGLAN
GIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIRSSLSEKRALTDPIQG
TEYSAESLVRNLQWAKAHELPESMCLKFDCGVQIQLGFAAEFSNVMIIYTSIVYKPPE
IIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKDLPKHCLYTRLSSLQKLKEHL
VFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRGLGRKTCFQTCLMSNGPYQSS
AATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCSRTPDAFISSFAHHASCHF
SRSNVPVETTDEIPFSFSDRLRISEK"
BASE COUNT 806 a 603 c 710 g 756 t
ORIGIN
1 ccctttgcgc ggctggcgcg gccagcaggc caggctcccc tcggcaaacc tgtctaattg
61 gggcggggag cggagcttcc tcctctgagg gccgtgccgc gctgccagat ttgttcttcc
121 gcccctgcct ccgcggctcg gaggcgagcg gaaggtgccc cggggccgag gcccgtgacg
181 gggcgggcgg gagccccggc agtccggggt cgccggcgag ggccatgtcg ctgttggggg
241 acccgctaca ggccctgccg ccctcggccg cccccacggg gccgctgctc gcccctccgg
301 ccggcgcgac cctcaaccgc ctgcgggagc cgctgctgcg gaggctcagc gagctcctgg
361 atcaggcgcc cgagggccgg ggctggagga gactggcgga gctggcgggg agtcgcgggc
421 gcctccgcct cagttgccta gacctggagc agtgttctct taaggtactg gagcctgaag
481 gaagccccag cctgtgtctg ctgaagttaa tgggtgaaaa aggttgcaca gtcacagaat
541 tgagtgattt cctgcaggct atggaacaca ctgaagttct tcagcttctc agccccccag
601 gaataaagat tactgtaaac ccagagtcaa aggcagtctt ggctggacag tttgtgaaac
661 tgtgttgccg ggcaactgga catccttttg ttcaatatca gtggttcaaa atgaataaag
721 agattccaaa tggaaataca tcagagctta tttttaatgc agtgcatgta aaagatgcag
781 gcttttatgt ctgtcgagct aataacaatt tcacctttga attcagccag tggtcacagc
841 tggatgtttg cgacatccca gagagcttcc agagaagtgt tgatggcgtc tctgaatcca
901 agttgcaaat ctgtgttgaa ccaacttccc aaaagctgat gccaggcagc acattggttt
961 tacagtgtgt tgctgttgga agccctattc ctcactacca gtggttcaaa aatgaattac
1021 cattaacaca tgagaccaaa aagctataca tggtgcctta tgtggatttg gaacaccaag
1081 gaacctactg gtgtcatgta tataatgatc gagacagtca agatagcaag aaggtagaaa
1141 tcatcatagg aagaacagat gaggcagtgg agtgcactga agatgaatta aataatcttg
1201 gtcatcctga taataaagag caaacaactg accagccttt ggcgaaggac aaggttgccc
1261 ttttgatagg aaatatgaat taccgggagc accccaagct caaagctcct ttggtggatg
1321 tgtacgaatt gactaactta ctgagacagc tggacttcaa agtggtttca ctgttggatc
1381 ttactgaata tgagatgcgt aatgctgtgg atgagttttt actcctttta gacaagggag
1441 tatatgggtt attatattat gcaggacatg gttatgaaaa ttttgggaac agcttcatgg
1501 tccccgttga tgctccaaat ccatataggt ctgaaaattg tctgtgtgta caaaatatac
1561 tgaaattgat gcaagaaaaa gaaactggac ttaatgtgtt cttattggat atgtgtagga
1621 aaagaaatga ctacgatgat accattccaa tcttggatgc actaaaagtc accgccaata
1681 ttgtgtttgg atatgccacg tgtcaaggag cagaagcttt tgaaatccag cattctggat
1741 tggcaaatgg aatctttatg aaatttttaa aagacagatt attagaagat aagaaaatca
1801 ctgtgttact ggatgaagtt gcagaagata tgggtaagtg tcaccttacc aaaggcaaac
1861 aggctctaga gattcgaagt agtttatctg agaagagagc acttactgat ccaatacagg
1921 gaacagaata ttctgctgaa tctcttgtgc ggaatctaca gtgggccaag gctcatgaac
1981 ttccagaaag tatgtgtctt aagtttgact gtggtgttca gattcaatta ggatttgcag
2041 ctgagttttc caatgtcatg atcatctata caagtatagt ttacaaacca ccggagataa
2101 taatgtgtga tgcctacgtt actgattttc cacttgatct agatattgat ccaaaagatg
2161 caaataaagg cacacctgaa gaaactggca gctacttggt atcaaaggat cttcccaagc
2221 attgcctcta taccagactc agttcactgc aaaaattaaa ggaacatcta gtcttcacag
2281 tatgtttatc atatcagtac tcaggattgg aagatactgt agaggacaag caggaagtga
2341 atgttgggaa acctctcatt gctaaattag acatgcatcg aggtttggga aggaagactt
2401 gctttcaaac ttgtcttatg tctaatggtc cttaccagag ttctgcagcc acctcaggag
2461 gagcagggca ttatcactca ttgcaagacc cattccatgg tgtttaccat tcacatcctg
2521 gtaatccaag taatgttaca ccagcagata gctgtcattg cagccggact ccagatgcat
2581 ttatttcaag tttcgctcac catgcttcat gtcattttag tagaagtaat gtgccagtag
2641 agacaactga tgaaatacca tttagtttct ctgacaggct cagaatttct gaaaaatgac
2701 ctccttgttt ttgaaagtta gcataatttt agatgcctgt gaaatagtac tgcacttaca
2761 taaagtgaga cattgtgaaa aggcaaattt gtatatgtag agaaagaata gtagtaactg
2821 tttcatagca aacttcagga ctttgagatg ttgaaattac attatttaat tacag
//