LOCUS AK291331 2146 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76844 complete cds, highly similar to Homo
sapiens TRAF-type zinc finger domain containing 1 (TRAFD1), mRNA.
ACCESSION AK291331
VERSION AK291331.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2146)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2146
/clone="NTONG2005742"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000424128"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 72..1820
/codon_start=1
/note="highly similar to Homo sapiens TRAF-type zinc
finger domain containing 1 (TRAFD1), mRNA"
/protein_id="BAF84020.1"
/transl_table=1
/translation="MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKE
PFPKSDMETHMAAEHCQVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKL
KEHEDYCGARTELCGNCGRNVLVKDLKTHPEVCGRVGEEKRNEVAIPPNAYDESWGQD
GIWIASQLLRQIEALDPPMRLPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQ
ERQERNRGQQPPKEGGEESANLDFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGP
RSLSDIKGAADEIMLPCEFCEELYPEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEP
DVIFQNFLQQAASNQLDSLMGLSNSHPVEESIIIPCEFCGVQLEEEVLFHHQDQCDQR
PATATNHVTEGIPRLDSQPQETSPELPRRRVRHQGDLSSGYLDDTKQETANGPTSCLP
PSRPINNMTATYNQLSRSTSGPRPGCQPSSPCVPKLSNSDSQDIQGRNRDSQNGAIAP
GHVSVIRPPQNLYPENIVPSFSPGPSGRYGASGRSEGGRNSRVTPAAANYRSRTAKAK
PSKQQGAGDAEEEEEE"
BASE COUNT 544 a 531 c 579 g 492 t
ORIGIN
1 agaggaggct ccgtgtctgc agctagtgtg tcaactcagc gtttctcctc tcgtccctgg
61 aagagctaaa gatggctgaa tttctagatg accaggaaac tcgactgtgt gacaactgca
121 aaaaagaaat tcctgtgttt aactttacca tccatgagat ccactgtcaa aggaacattg
181 gtatgtgtcc tacctgtaag gaaccatttc ccaaatctga catggagact cacatggctg
241 cagaacactg tcaggtgacc tgcaaatgta acaagaagtt ggagaagagg ctgttaaaga
301 agcatgagga gactgagtgc cctttgcggc ttgctgtctg ccagcactgt gatttagaac
361 tttccattct caaactgaag gaacatgaag attattgtgg tgcccggacg gaactatgtg
421 gcaactgtgg tcgcaatgtc cttgtgaaag atctgaagac tcaccctgaa gtttgtggga
481 gagtggggga ggaaaagaga aatgaggttg ccatacctcc taatgcatat gatgaatctt
541 ggggtcagga tggaatctgg attgcatccc aactcctcag acaaattgag gctctggacc
601 cacccatgag gctgccgcga aggcccctga gagcctttga atcagatgtt ttccacaata
661 gaactaccaa ccaaaggaac attacagccc aggtttcaat tcagaataat ctgtttgaag
721 aacaagagag gcaggaaagg aatagaggcc aacagccccc caaagagggt ggtgaagaga
781 gtgcaaactt ggacttcatg ttggccctaa gtctgcaaaa tgaaggccaa gcctccagtg
841 tggcagagca ggacttctgg agggccgtat gtgaggccga ccagtctcat ggcggtccca
901 ggtctctcag tgacataaag ggtgcagctg acgagatcat gttgccttgt gaattttgtg
961 aggagctcta cccagaggaa ctgctgattg accatcagac aagctgtaac ccttcacgtg
1021 ccttaccttc actcaatact ggcagctctt cccccagagg ggtggaggaa cctgatgtca
1081 tcttccagaa cttcttgcaa caggctgcaa gtaaccagtt agactctttg atgggcctga
1141 gcaattcaca ccctgtggag gagagcatca ttatcccatg tgaattctgt ggggtacagc
1201 tggaagagga ggtgctgttc catcaccagg accagtgtga ccaacgccca gccactgcaa
1261 ccaaccatgt gacagagggg attcctagac tggattccca gcctcaagag acctcaccag
1321 agctgcccag gaggcgtgtc agacaccagg gagacctgtc ttctggttac ctggatgata
1381 ctaagcagga aacagctaat gggcccacct cctgtctgcc tcccagccga cccattaaca
1441 atatgacagc tacctataac cagctatcga gatcaacatc aggccccaga cctgggtgcc
1501 agcccagctc tccttgtgtg ccgaagctca gcaactcaga cagccaggac atccaggggc
1561 ggaatcgaga cagccagaat ggggccatag cccctgggca cgtttcagtg attcgccctc
1621 ctcaaaatct ctacccagaa aacattgtgc cctctttctc ccctgggcct tcagggagat
1681 acggagctag tggtaggagt gaaggtggca ggaattcccg ggtcacccct gcagctgcca
1741 actaccgcag cagaactgca aaggcaaagc cttccaagca acagggagct ggggatgcag
1801 aagaggaaga ggaggagtaa tggtgtctcc agagacttta catcggttcc tgtcttctgt
1861 gcacagcagc acttgccgct gtgcaggccc acctctttgg ctctttgggt gggagagttt
1921 ttccagattt tagatttttc taggttatgg ccattttgtg tcttttgagg ttgtgctgtg
1981 ggggtttggg tttgagggaa gggagcaggg tggcggttga ggaacgcttc agccttagct
2041 gctacctttc ggcagcagtg aaatacaagc tgcagcctcg gctgccaggg ctcccttttg
2101 acttattgtc gccactgccc cttggtgctg tgtggtccca gtggaa
//