LOCUS AK291322 2474 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78083 complete cds, highly similar to Homo
sapiens syntaxin binding protein 3, mRNA.
ACCESSION AK291322
VERSION AK291322.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2474)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2474
/clone="NTONG2003815"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000424119"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 56..1834
/codon_start=1
/note="highly similar to Homo sapiens syntaxin binding
protein 3, mRNA"
/protein_id="BAF84011.1"
/transl_table=1
/translation="MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKL
LASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENK
YKAAYIYFTDFCPDNLFNKIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCY
SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDY
YKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGK
EKEAILEEDDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKM
PHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLP
VLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIRNWSYLGVPIV
PQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGS
GAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHV
LTPKKLLDDIKMLNKPKDKVSLIKDE"
BASE COUNT 860 a 381 c 498 g 735 t
ORIGIN
1 taaaaagtag gttgggagtg gaaggtggtg gctgctgctc cgcagtgtcg ggaagatggc
61 gccgccggtg gcagagaggg ggctaaagag cgtcgtgtgg cagaagataa aagcaacagt
121 gtttgatgac tgcaagaaag aaggcgaatg gaagataatg cttttagatg aatttaccac
181 taagcttttg gcatcgtgtt gcaaaatgac agatcttcta gaagaaggta ttactgttgt
241 agagaatatt tataagaacc gtgaacctgt cagacaaatg aaagctcttt atttcatcac
301 tccgacatca aagtctgtag attgtttctt acatgatttt gcaagtaaat cggagaacaa
361 gtataaagca gcatatattt acttcactga cttttgccct gataatctct ttaacaaaat
421 taaggcttct tgctccaagt caataagaag atgtaaagaa ataaatattt ccttcattcc
481 acatgaatct caggtgtata ctcttgatgt accagatgca ttctattact gttatagtcc
541 agaccctggt aatgcaaagg gaaaagatgc cattatggaa acaatggctg accagatagt
601 tacagtgtgt gccaccttgg atgaaaatcc cggagtaaga tataaaagta aacctctaga
661 taatgccagt aagcttgcac agcttgttga aaaaaagctt gaagactact acaagattga
721 tgaaaagagc ctaataaagg gtaaaactca ttcacagctc ttaataattg atcgtggctt
781 tgatcctgtg tccactgtcc tgcatgaact gacctttcag gcaatggcat atgatctact
841 accaattgag aatgatacat acaaatataa aacagatgga aaagaaaagg aggccatcct
901 tgaagaagat gatgacctct gggttagaat tcgacatcga catattgcgg ttgtgttaga
961 ggaaattccc aagcttatga aagaaatttc atcaacaaag aaagcaacag aaggaaagac
1021 atcacttagt gctcttaccc agctgatgaa aaagatgccc catttccgaa aacagattac
1081 taagcaagtt gtccatctta acttagcaga agattgcatg aataagttca agcttaatat
1141 agaaaagctc tgcaaaactg aacaggacct ggcacttgga actgatgcag aaggacagaa
1201 ggtgaaagat tccatgcgag tactccttcc agttctactc aacaaaaatc atgataattg
1261 tgataaaata agagcaattc tactttatat cttcagtatt aatggaacta cggaagaaaa
1321 tttggacagg ttgatccaga atgtaaagat agaaaatgag agtgacatga ttcgtaactg
1381 gagttacctt ggtgttccca ttgttcccca atctcaacaa ggcaaaccgt taagaaagga
1441 tcggtctgca gaagaaactt ttcagctctc tcggtggaca ccttttatca aagatattat
1501 ggaggatgct attgataata gattagattc aaaagaatgg ccatattgtt cccagtgtcc
1561 agcagtatgg aatggttcag gagctgtaag tgctcgccag aaacccagag ctaattattt
1621 agaagaccga aaaaatgggt caaagctgat tgtttttgta attggaggga tcacatactc
1681 tgaagtgcgt tgtgcttatg aagtttctca ggcacataaa tcctgtgaag ttattattgg
1741 ttctacacat gttttaacac ccaaaaagct gttggatgat ataaagatgc tgaataaacc
1801 caaggataaa gtctccttaa ttaaagatga atagcgtttc tttttggagg gtttagagat
1861 tcttactaat atgttgaact aaaatagaaa gaaaatgttg ctgtcatgta atttaaacaa
1921 tgtaaatatt ttatggaata atggcttttc aaatacattt cttaaggaac tgtttatgat
1981 tattactgga tttgtcattt ttgataattt aaatattgct gctgctttgt agatgatgag
2041 aagaaatgtt aaagtgcttt ctaaaaggaa attttttcac ctttggagga gaatatatta
2101 gagttgtggg taatttttca cagccaccta tgtacatact aattacccat tggatactta
2161 tatctaaaag tctcatgctg aagtatagtt tttgggaaag aatgatttta aataaagaga
2221 ttgtaaaagt aaaaaactgt aaatgtatat gtatgataga attgtttcct ctaagtgtag
2281 tttttctttc aactaaaatt cagtttatgt gtaaaataat tcagtcatta atagaaatgg
2341 agtgatttca cagtgtgtac tgttttgcca catacttcta aagaacacaa ttttatataa
2401 ttttgaaatc atgtatgttt aaattagaaa accaaaaatc atgaacattc taagagaaaa
2461 taaatataga attt
//