LOCUS AK291282 2170 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78020 complete cds.
ACCESSION AK291282
VERSION AK291282.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2170)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2170
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8007867"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424079"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 286..1773
/codon_start=1
/protein_id="BAF83971.1"
/transl_table=1
/translation="MRLTRCQAALAAAITLNLLVLFYVSWLQHQPRNSRARGPRRASA
AGPRVTVLVREFEAFDNAVPELVDSFLQQDPAQPVVVAADTLPYPPLALPRIPNVRLA
LLQPALDRPAAASRPETYVATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPV
ATANPARCLALNVSLREWTARYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPV
GTSLFLQTALRGWAVQLLDLTFAAARQPPLATAHARWKAEREGRARRAALLRALGIRL
VSWEGGRLEWFGCNKETTRCFGTVVGDTPAYLYEERWTPPCCLRALRETARYVVGVLE
AAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGF
VWEKAVEGDFFRVQYSESNHLHVDLWPFYPRNGVMTKDTWLDHRQDVEFPEHFLQPLV
PLPFAGFVAQAPNNYRRFLELKFGPGVIENPQYPNPALLSLTGSG"
BASE COUNT 362 a 711 c 733 g 364 t
ORIGIN
1 attgctccaa gatggcggcg gcggcggcag cgggagcgca gctcagctgg gctggaactg
61 ccctcctgga actcccccag cctacaacct aggaggtgca gggactgagg ctcaggccaa
121 atcgcaactc agacccagtg aacccaaggc ctgaagagaa tttggattca tttaccttgt
181 tttgtgggga ctggagagac aagtaaactc tcagagtaac tgtcccctct gactaccatt
241 tctaaggatg ctccggaggc ccagctagcc ccagacttcg gccccatgcg gctcacccgc
301 tgccaggctg ccctggcggc cgccatcacc ctcaaccttc tggtcctctt ctatgtctcg
361 tggctgcagc accagcctag gaattcccgg gcccgggggc cccgtcgtgc ctctgctgcc
421 ggcccccgtg tcaccgtcct ggtgcgggag ttcgaggcat ttgacaacgc ggtgcccgag
481 ctggtagact ccttcctgca gcaagaccca gcccagcccg tggtggtggc agccgacacg
541 ctcccctacc cgcccctggc cctgccccgc atccccaacg tgcgtctggc gctgctccag
601 cccgccctgg accggccagc cgcagcctcg cgcccggaga cctacgtggc caccgagttt
661 gtggccctag tacctgatgg ggcgcgggct gaggcacctg gcctgctgga gcgcatggtg
721 gaggcgctcc gcgcaggaag cgcacgtctg gtggccgccc cggttgccac ggccaaccct
781 gccaggtgcc tggccctgaa cgtcagcctg cgagagtgga ccgcccgcta tggcgcagcc
841 cccgccgcgc cccgctgcga cgccctggac ggagatgctg tggtgctcct gcgcgcccgc
901 gacctcttca acctctcggc gcccctggcc cggccggtgg gcaccagcct ctttctgcag
961 accgcccttc gcggctgggc ggtgcagctg ctggacttga ccttcgccgc ggcgcgccag
1021 cccccgctgg ccacggccca cgcgcgctgg aaggctgagc gcgagggacg cgctcggcgg
1081 gcggcgctgc tccgcgcgct gggcatccgc ctagtgagct gggaaggcgg gcggctggag
1141 tggttcggct gcaacaagga gaccacgcgc tgcttcggaa ccgtggtggg cgacacgccc
1201 gcctacctct acgaggagcg ctggacgccc ccctgctgcc tgcgcgcgct gcgcgagacc
1261 gcccgctatg tggtgggcgt gctggaggct gcgggcgtgc gctactggct cgagggcggc
1321 tcactgctgg gggccgcccg ccacggggac atcatcccat gggactacga cgtggacctg
1381 ggcatctact tggaggacgt gggcaactgc gagcagctgc ggggggcaga ggccggctcg
1441 gtggtggatg agcgcggctt cgtatgggag aaggcggtcg agggcgactt tttccgcgtg
1501 cagtacagcg aaagcaacca cttgcacgtg gacctgtggc ccttctaccc ccgcaatggc
1561 gtcatgacca aggacacgtg gctggaccac cggcaggatg tggagtttcc cgagcacttc
1621 ctgcagccgc tggtgcccct gccctttgcc ggcttcgtgg cgcaggcgcc taacaactac
1681 cgccgcttcc tggagctcaa gttcgggccc ggggtcatcg agaaccccca gtaccccaac
1741 ccggcactgc tgagtctgac gggaagcggc tgaagccctg ataacctcgc ctttgttttt
1801 cgggggtctg tctggatgtg gagaagctct gtgtgagcgg tgaggggtgg agggatgtcg
1861 cggagagggg aagggggaaa ctgaccaaga aagaaattct aaggagagca tgagagaagg
1921 ctggcattgg caggaggaga gcaccaggac gaggatggga agcgacctcc agatttatca
1981 aatggtcatg cccactggga gccgtggata tgcgtgggga catcctgggt catctcagtc
2041 atggagggag acggggatgt cacgccgtcc cgcagggccc agcacagccc cagacccgaa
2101 aaaagtgttc tgcccaagat tccgagagcc ctgcgctcta gggcaggggc agagttttgg
2161 aaacagtgca
//