LOCUS AK291268 1410 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75466 complete cds, highly similar to Homo
sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5),
transcript variant 1, mRNA.
ACCESSION AK291268
VERSION AK291268.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1410)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1410
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8005375"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424065"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 72..1328
/codon_start=1
/note="highly similar to Homo sapiens Ras association
(RalGDS/AF-6) domain family 5 (RASSF5), transcript
variant 1, mRNA"
/protein_id="BAF83957.1"
/transl_table=1
/translation="MAMASPAIGQRPYPLLLDPEPPRYLQSLSGPELPPPPPDRSSRL
CVPAPLSTAPGAREGRSARRAARGNLEPPPRASRPARPLRPGLQQRLRRRPGAPRPRD
VRSIFEQPQDPRVPAERGEGHCFAELVLPGGPGWCDLCGREVLRQALRCTNCKFTCHP
ECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQNVCKPVEETQRPPTLQEIKQKIDSY
NTREKNCLGMKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDK
RTSFYLPLDAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQK
LSIADRPLYLRLLAGPDTEVLSFVLKENETGEVEWDAFSIPELQNFVTILEKEEQDKI
QQVQKKYDKFRQKLEEALRESQGKPG"
BASE COUNT 302 a 453 c 407 g 248 t
ORIGIN
1 actcggggct ggctcgggag tagcgcagtc gccaaagccg ccgctgccaa agctgccgcc
61 actagccggg catggccatg gcgtccccgg ccatcgggca gcgcccgtac ccgctactat
121 tggaccccga gccgccgcgc tatctacaga gcctgagcgg ccccgagcta ccgccgccgc
181 cccccgaccg gtcctcgcgc ctctgtgtcc cggcgcccct ctccactgcg cccggggcgc
241 gcgaggggcg cagcgcccgg agggctgccc gggggaacct ggagcccccg ccccgggcct
301 cccgacccgc tcgcccgctc cggcctggtc tgcagcagag actgcggcgg cggcctggag
361 cgccccgacc ccgcgacgtg cggagcatct tcgagcagcc gcaggatccc agagtcccgg
421 cggagcgagg cgaggggcac tgcttcgccg agttggtgct gccgggcggc cccggctggt
481 gtgacctgtg cggacgagag gtgctgcggc aggcgctgcg ctgcactaac tgtaaattca
541 cctgtcaccc agaatgccgc agcctgatcc agttggactg cagtcagcag gagggtttat
601 cccgggacag accctctcca gaaagcaccc tcaccgtgac cttcagccag aatgtctgta
661 aacctgtgga ggagacacag cgcccgccca cactgcagga gatcaagcag aagatcgaca
721 gctacaacac gcgagagaag aactgcctgg gcatgaaact gagtgaagac ggcacctaca
781 cgggtttcat caaagtgcat ctgaaactcc ggcggcctgt gacggtgcct gctgggatcc
841 ggccccagtc catctatgat gccatcaagg aggtgaacct ggcggctacc acggacaagc
901 ggacatcctt ctacctgccc ctagatgcca tcaagcagct gcacatcagc agcaccacca
961 ccgtcagtga ggtcatccag gggctgctca agaagttcat ggttgtggac aatccccaga
1021 agtttgcact ttttaagcgg atacacaagg acggacaagt gctcttccag aaactctcca
1081 ttgctgaccg ccccctctac ctgcgcctgc ttgctgggcc tgacacggag gtcctcagct
1141 ttgtgctaaa ggagaatgaa actggagagg tagagtggga tgccttctcc atccctgaac
1201 ttcagaactt cgtaacaatc ctggaaaaag aggagcagga caaaatccaa caagtgcaaa
1261 agaagtatga caagtttagg cagaaactgg aggaggcctt aagagaatcc cagggcaaac
1321 ctgggtaacc ggtcctgctt cctctcctcc tggtgcattc agatttattt gtattattaa
1381 ttattatttt gcaacagaca ctttttctca
//