LOCUS AK291267 2719 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77541 complete cds, highly similar to Homo
sapiens zinc finger protein 483 (ZNF483), transcript variant 1,
mRNA.
ACCESSION AK291267
VERSION AK291267.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2719)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2719
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8005108"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424064"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 225..2459
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
483 (ZNF483), transcript variant 1, mRNA"
/protein_id="BAF83956.1"
/transl_table=1
/translation="MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGN
AADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLT
ILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTV
CPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLEL
ISQLKWVELPWLLEEVSKSSRLDESALDKIIERCLRDDDHGLMEESQQYCGSSEEDHG
NQGNSKGRVAQNKTLGSGSRGKKFDPDKSPFGHNFKETSDLIKHLRVYLRKKSRRYNE
SKKPFSFHSDLVLNRKEKTAGEKSRKSNDGGKVLSHSSALTEHQKRQKIHLGDRSQKC
SKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGEKTHKCSKCGKAFGY
SASLTKHRRIHTGEKPYMCNECGKAFSDSSSLTPHHRTHSGEKPFKCDDCGKGFTLSA
HLIKHQRIHTGEKPYKCKDCGRPFSDSSSLIQHQRIHTGEKPYTCSNCGKSFSHSSSL
SKHQRIHTGEKPYKCGECGKAFRQNSCLTRHQRIHTGEKPYLCNDCGMTFSHFTSVIY
HQRLHSGEKPYKCNQCEKAFPTHSLLSRHQRIHTGVKPYKCKECGKSFSQSSSLNEHH
RIHTGEKPYECNYCGATFSRSSILVEHLKIHTGRREYECNECEKTFKSNSGLIRHRGF
HSAE"
BASE COUNT 876 a 516 c 630 g 697 t
ORIGIN
1 agtggtcccc gcaggcttgc gcgcgcactc gctgcgggac aagcttctgg aagctctttg
61 cggtggcgtt ggtgctgttt gcggatgctg atgcagtttc tgcaggactg taaactggat
121 tcctggaacc tttgatattc ctggctgtgt atagtgcctg ttggtggact gtactgatac
181 tcaactagag tgtgaaggga ctggattcct gcccctgaga cacaatgcaa gctgtagtgc
241 ccttgaacaa gatgacagcc atctcaccag aacctcaaac tctggcctcg actgaacaaa
301 atgaggtccc aagagtggtt acttctgggg aacaagaagc tattttaaga ggaaatgctg
361 ctgatgcaga gtctttcaga cagaggttta ggtggttttg ttactcagaa gtagctggac
421 ccaggaaagc tctgagtcaa ctctgggagc tctgcaatca gtggctgaga ccagacattc
481 acacgaaaga acagatttta gagcttctgg tgtttgagca gttcctgacc attttgcctg
541 gggagatcag gatttgggta aagtcacaac atcctgagag tagtgaggaa gtggtgaccc
601 taatagaaga tttgacccag atgcttgaag aaaaagatcc agtctctcaa gattctactg
661 tttcccaaga ggagaactca aaagaggata aaatggtcac tgtttgtccc aatactgagt
721 cctgtgaatc tataacattg aaggatgtag ctgtgaactt ttcaagagga gagtggaaga
781 agctggagcc ttttcaaaag gagctatata aggaagtgct actggaaaac ctcaggaacc
841 tagaatttct ggactttcca gtttcaaaat tagagttgat ttcccagcta aagtgggttg
901 aattgccatg gctgctggaa gaagtctcaa aaagctcccg actagatgaa tcagctttag
961 ataaaataat agaaaggtgc ctcagggatg atgatcatgg cttgatggaa gaatcccagc
1021 aatattgtgg cagctcagag gaggatcacg gtaatcaggg aaattcaaaa ggaagagtcg
1081 cacaaaacaa aactcttggg agtggcagta ggggtaagaa atttgaccca gataaaagcc
1141 cctttggaca taatttcaaa gaaacttcag acttaattaa acatctgaga gtctacttga
1201 ggaagaaatc tcggaggtat aatgaaagca agaaaccctt cagttttcat tcagaccttg
1261 ttctgaaccg caaggagaaa accgccggag aaaagtcacg gaaatctaat gatggtggga
1321 aagtcctgag tcactcttca gctcttactg aacatcagaa acgtcagaag attcatttgg
1381 gggataggtc ccaaaaatgc agtaagtgtg ggataatctt tattagaaga tcaactcttt
1441 ctaggagaaa aacccctatg tgtgagaaat gtcggaaaga ttcatgtcaa gaagcagcct
1501 taaataaaga tgagggaaat gagagtggag aaaaaactca taaatgtagt aagtgtggaa
1561 aagcctttgg ctatagcgcc tcactcacca aacatcggag aattcacact ggagaaaaac
1621 cctatatgtg taatgaatgt ggaaaagctt ttagtgatag ttcatcgctc acaccacatc
1681 atagaactca tagtggagag aaacccttca aatgtgatga ctgtgggaaa ggtttcaccc
1741 taagtgctca cctcattaaa catcagagaa ttcatactgg agaaaaacct tataaatgta
1801 aagactgtgg gagacccttt agtgacagtt catctcttat tcaacatcag cgaattcata
1861 ctggagaaaa accctataca tgtagcaatt gtggaaaatc cttcagtcat agctcatccc
1921 tttccaaaca tcagagaatt catactggag agaaacccta taaatgtggc gaatgtggaa
1981 aagcctttag gcagaattca tgccttaccc ggcatcagag aattcacact ggagaaaaac
2041 catatttgtg taatgattgc ggaatgactt ttagccattt tacgtctgtg atttatcatc
2101 aaagacttca ttcaggagaa aaaccctaca aatgtaacca gtgtgagaaa gccttcccaa
2161 cccattcact gctaagtcgt catcagagaa ttcatactgg tgtaaaacct tataaatgta
2221 aagaatgtgg gaagtccttc agtcagagtt catctcttaa tgagcaccac cgaattcata
2281 caggagagaa accctatgag tgtaactatt gtggtgcaac ctttagtcga agctcaatcc
2341 ttgtagaaca cctaaaaatt cataccggaa ggagagaata tgaatgtaac gaatgtgaga
2401 agacatttaa aagtaattca ggcctcatta gacatcgggg atttcactct gcagagtaat
2461 cctggaacta cattaaagtg gggggaattt aattcaaatt gtcagttact gaaaccctgg
2521 gatgtaaact tacagtattg atcagtagct gcagctttcg taaattggca gttaggaaaa
2581 atattctttt gcccattcat ccctcttctt ttcaaggatg gcaacgactg gtaaacagta
2641 attagttggt aaagtcactg gaaagggaag aatgcaaaat gattctgagg ccagacgaat
2701 tggaaaagct cttttcttc
//