LOCUS AK291248 2871 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77538 complete cds, highly similar to Homo
sapiens NMDA receptor regulated 1-like (NARG1L), transcript
variant 1, mRNA.
ACCESSION AK291248
VERSION AK291248.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2871)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2871
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8004109"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424045"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 239..2833
/codon_start=1
/note="highly similar to Homo sapiens NMDA receptor
regulated 1-like (NARG1L), transcript variant 1, mRNA"
/protein_id="BAF83937.1"
/transl_table=1
/translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAE
HGETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKC
YRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHL
LKDYDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEK
QICDKLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEER
LQIYEEISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYY
NTEKVSIIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSL
ALDYINAAIASTPTLIELFYMKAKIYKHIGNLKEAAKWMDEAQSLDTADRFINSKCAK
YMLRANMIKEAEEMCSKFTREGTSAMENLNEMQCMWFQTECISAYQRLGRYGDALKKC
HEVERHFFEITDDQFDFHTYCMRKMTLRAYVDLLRLEDILRRHAFYFKAARSAIEIYL
KLYDNPLTNESKQQEINSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQ
KKKRDEEEEEASGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIY
FRKGKFLLMLQSVKRAFAINSNNPWLHECLIRFSKSVSNHSNLPDIVSKVLSQEMQKI
FVKKDLESFNEDFLKRNATSLQHLLSGAKMMYFLDKSRQEKAIAIATRLDETIKDKDV
KTLIKVSEALLDGSFGNCSSQYEEYRMACHNLLPFTSAFLPAVNEVDNPNVALNHTAN
YDVLANEI"
BASE COUNT 982 a 540 c 599 g 750 t
ORIGIN
1 cgccgctggc caaaaagcgg agcccagggg aagcgtgtcc tgctcagacc gccttccttc
61 tccattgcca cccgtgccga acagccaggc tgcccaattg caactgtaga ccaatgaact
121 aatccatcgc ccgcagcccg actctcagca gcggttcgtc ccggtgccca cccccgcgaa
181 gcggagcgcc cgggcaccta gcctccctgc cggccaccta gcctccctgc cggccacgat
241 gccgaacgtg ctgctgccgc ccaaggagag caacctcttc aaacgcatct tgaaatgtta
301 tgaacagaag cagtacaaaa atggcctcaa gttttgcaag atgattctgt cgaacccaaa
361 atttgctgaa catggagaga ctttggctat gaaaggatta acactgaact gtttaggaaa
421 aaaagaagaa gcttatgagt ttgttcgtaa aggacttcgt aatgatgtca agagtcatgt
481 ctgttggcat gtatatggac tcttgcagcg ttctgataaa aaatatgatg aagctataaa
541 atgttaccga aatgccctca aattagataa agataacctg caaattttga gggatctctc
601 actgttgcag atccaaatga gagaccttga aggttaccga gagacaagat accagcttct
661 tcagttgcgc cccacacagc gtgcctcctg gattggatat gctattgcat accatttgct
721 gaaagattat gatatggccc taaaactgtt ggaagaattt agacaaactc agcaagttcc
781 tccaaacaaa atagattatg aatatagtga attgatatta taccagaatc aagtgatgag
841 agaggcagat ctgttgcagg aatctttgga acatatagaa atgtatgaga aacaaatatg
901 tgataaactt ttggtggaag aaattaaagg ggaaatactg ttgaaattgg gaagattaaa
961 agaagccagt gaagtgttca aaaacttgat tgatcgaaat gcagaaaact ggtgttatta
1021 tgaaggcttg gaaaaagctc tacaaattag cactttagaa gagaggcttc aaatttatga
1081 agaaattagt aagcagcacc ccaaagcaat tacacccaga agattacctt tgactcttgt
1141 cccaggtgaa agatttagag aactaatgga taagttcctg agggttaact tcagtaaagg
1201 ctgcccaccc ttgtttacta ctttgaaatc tttatattac aatacagaaa aggtttctat
1261 aatccaggaa cttgttacta attatgaagc ctctcttaaa acgtgtgact tttttagccc
1321 atatgagaat ggggagaagg aacccccgac aacactactc tgggttcagt atttcctggc
1381 acagcacttt gataaacttg gacagtattc tttggctttg gattatatta atgctgcaat
1441 tgctagtact ccaactctaa tagaattatt ctatatgaaa gcaaaaattt acaagcatat
1501 aggtaatctc aaagaagctg caaagtggat ggatgaagca cagtctttgg acacagctga
1561 tagattcatc aattccaaat gtgcaaaata catgcttcga gcaaatatga taaaagaagc
1621 agaggaaatg tgctccaagt tcacaaggga aggaacatct gccatggaaa atctaaatga
1681 aatgcagtgt atgtggtttc agacagaatg catttcagct tatcagcgtc tggggagata
1741 cggggatgcc ttgaaaaaat gtcatgaagt agaaaggcat ttttttgaga taactgatga
1801 ccaattcgac ttccatacat actgcatgag aaagatgacc cttcgtgcct atgttgacct
1861 tttgagatta gaagatatac tcagaagaca tgccttttat ttcaaggctg ctagatcagc
1921 gattgaaata tacttgaaat tgtatgataa tcccttaacc aatgaaagca aacaacaaga
1981 aataaactca gaaaacttgt cagccaaaga attgaagaaa atgcttagca agcagagaag
2041 agctcagaaa aaggctaaac tagaagaaga aagaaagcat gcagaaagag aacgtcaaca
2101 gaaaaatcaa aagaaaaaaa gagatgaaga agaagaagaa gccagtggcc ttaaggaaga
2161 acttatacct gaaaaattag aaagggtaga aaatccatta gaggaagccg ttaagttcct
2221 tatacctctt aagaaccttg ttgctgataa cattgacact catctgttag catttgaaat
2281 atattttaga aaaggaaagt ttctgttaat gctgcagtct gtcaaacgag cttttgccat
2341 taacagtaat aacccatggt tacatgaatg tttaattaga ttttctaaat ctgtgtctaa
2401 tcatagtaat cttccagaca ttgtgagcaa agttctatct caagaaatgc agaaaatatt
2461 tgtcaaaaag gatttggaaa gttttaatga ggattttctg aaacgtaacg ctacctctct
2521 tcagcatcta ctttcaggtg ctaaaatgat gtattttctg gacaagtcaa ggcaggagaa
2581 agcaattgct atagccacta gactagatga aactataaaa gataaagatg taaagacatt
2641 aataaaggtt tctgaagcac tgcttgatgg cagctttggg aactgtagtt cccaatatga
2701 agaatatagg atggcctgtc ataacctgct tccttttaca tctgccttct tgcctgctgt
2761 gaatgaagtc gacaatccta atgtggcact gaaccataca gctaattatg atgtcttggc
2821 aaatgaaatt tgaaatcttc tagaaagtag gctcctatag actcaaagct g
//