LOCUS AK291243 2099 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77537 complete cds, highly similar to Homo
sapiens zinc finger protein 26 (KOX 20) (ZNF26), mRNA.
ACCESSION AK291243
VERSION AK291243.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2099)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2099
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8003429"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424040_03"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 461..2062
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
26 (KOX 20) (ZNF26), mRNA"
/protein_id="BAF83932.1"
/transl_table=1
/translation="MATSFRTASCWGLLSFKDISMGFTWDEWQLLDSTQKYLYRDVIL
ENYHNLISVGYHGTKPDLIFKLEQGEDPWIINAKISRQSCPDGWEEWYQNNQDELESI
ERSYACSVLGRLNLSKTHDSSRQRLCNTRGKSLTQNSAPSRSYLRKNPDKFHGYEEPY
FLKHQRAHSIEKNCVCSECGKAFRCKSQLIVHLRIHTGERPYECSKCERAFSAKSNLN
AHQRVHTGEKPYSCSECEKVFSFRSQLIVHQEIHTGGKPYGCSECGKAYSWKSQLLLH
QRSHTGVKPYECSECGKAFSLKSPFVVHQRTHTGVKPHKCSECGKAFRSKSYLLVHIR
MHTGEKPYQCSDCGKAFNMKTQLIVHQGVHTGNNPYQCGECGKAFGRKEQLTAHLRAH
AGEKPYGCSECGKAFSSKSYLVIHRRTHTGERPYECSLCERAFCGKSQLIIHQRTHST
EKPYECNECEKAYPRKASLQIHQKTHSGEKPFKCSECGKAFTQKSSLSEHQRVHTGEK
PWKCSECGKSFCWNSGLRIHRKTHK"
BASE COUNT 614 a 458 c 551 g 476 t
ORIGIN
1 tcgggtgcgc gcgtgcaggg ctgtttccgg cttagactca gtggaccgga atctggccag
61 cgggtgtacc tggctgagtc tctgtggccg cggaggcgcg gagctaagcg gctcggatta
121 tcctgggcag accagagact tgaccagcta aacacttccg tcggtccggg gcgtggacgg
181 ggccagatca gcctcctgct ctcccgagtc agggccacgg aaaggcacaa atccatccgt
241 gcgactcctg gtacccagac cgggaggttg tctagtcacg cgcggtccgt gttgggcgag
301 agctgaggag ccggcgtccc tgccaacgac tcggccccgg gacggtcagg agcctggggc
361 cctggtcccg cacctgtctt cgggcggacg catccctcac ggtctctccg cagcccgcgg
421 gtcctgcccc cgcaggcagc gcgcgaacgt gggcgtgggg atggccacca gtttccggac
481 agcttcgtgc tggggattat tgtcattcaa ggatatatct atggggttca cctgggatga
541 atggcagcta ctggattcta cacagaagta cctgtacaga gatgtgatat tggaaaacta
601 tcataacctg atatcagtgg ggtatcatgg taccaagcct gacttaatct tcaagttgga
661 acaaggagaa gatccatgga taataaatgc caaaatttcc aggcagagct gtccagatgg
721 ctgggaagaa tggtaccaga acaatcaaga tgagcttgag agtattgaaa gaagctatgc
781 ttgtagtgtg ttgggaagac ttaatctgag caaaacccat gattcttcaa gacagagact
841 ctgtaacaca cgtggaaaaa gtttgacaca aaactcagct ccaagcagaa gttatttaag
901 aaagaatcct gataagtttc atggttatga agaaccatat tttcttaagc atcaaagagc
961 tcatagcata gaaaaaaact gtgtgtgtag tgaatgtggg aaagcttttc gttgtaagtc
1021 acagctcatt gtacatctca gaattcatac aggagagaga ccttatgaat gcagtaaatg
1081 tgaaagagcc ttcagtgcca agtcaaacct taatgctcat cagagagttc atacaggaga
1141 aaaaccctac tcatgtagtg agtgcgagaa ggtcttctct ttcaggtcac agctcattgt
1201 ccatcaggaa attcacacag gagggaaacc ctatggctgc agtgaatgtg ggaaagccta
1261 cagttggaaa tcacagcttc ttttacacca gagaagtcac acaggagtga aaccgtatga
1321 atgcagcgaa tgtgggaaag cctttagttt gaagtctcca ttcgttgtac accagagaac
1381 tcatacagga gtgaaacccc ataaatgcag tgaatgtggg aaagccttta ggagtaagtc
1441 ctatctcctt gttcacatcc gaatgcatac aggagaaaaa ccctatcaat gcagtgattg
1501 tgggaaagcc ttcaatatga agacacaact cattgtacat cagggagttc acacaggaaa
1561 taatccttat caatgcggtg aatgtgggaa agcctttggt aggaaggaac agctcactgc
1621 acatctgaga gctcatgcag gagagaagcc ctatggatgc agtgaatgtg ggaaggcttt
1681 cagcagcaag tcataccttg ttatacatag gagaacacac accggagaga gaccctatga
1741 atgtagtttg tgtgagagag ccttttgtgg aaaatcacag ctgattatac atcagagaac
1801 tcattcaact gagaagccct atgaatgcaa tgaatgtgaa aaagcctacc ctaggaaggc
1861 atcacttcag atacaccaga aaactcattc gggagagaaa ccttttaaat gcagtgaatg
1921 tggaaaagcc ttcactcaga agtcatctct cagtgaacat cagagagttc acactggaga
1981 gaaaccatgg aaatgctctg aatgtgggaa atccttctgt tggaattcag ggcttcgtat
2041 acatcggaag actcataaat gagaaatcag aatgatgcaa tgtgagaaac tgatgttca
//