LOCUS AK291240 2763 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77534 complete cds, highly similar to Homo
sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily
member 5) (MPP5), mRNA.
ACCESSION AK291240
VERSION AK291240.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2763)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2763
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8003264"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424037"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 458..2485
/codon_start=1
/note="highly similar to Homo sapiens membrane protein,
palmitoylated 5 (MAGUK p55 subfamily member 5) (MPP5),
mRNA"
/protein_id="BAF83929.1"
/transl_table=1
/translation="MTTSHMNGHVTEESDSEVKNVDLASPEEHQNHREMAVDCPGDLG
TRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNP
MFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQ
NAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALLNTPHIQ
ALLLAHDKVAEQEMQLEPITDERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMD
SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIP
SQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQA
YREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKRVLY
NANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFA
SAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQV
INSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREI
IEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR"
BASE COUNT 867 a 508 c 688 g 700 t
ORIGIN
1 ccgcgcggtc tagaagtgga gttgctggcg gctgcggcgg tgacggcggc gacggaggag
61 gcaggcggtg gggcgggggc ggggactaag gattctgagg tggggagtcg ggagtttctg
121 gattctttat ccggaatttc aagggccgcc ggagggctgt cgcttctgca gtgcgtagga
181 gcggccgggg cgggaggctc cgcggagccg aggcgtggag aataagaaag ccttgagttt
241 tgtgaaaaac cggagaagag aaactaaaag gacagtagaa aaggcttttc cagtttgcat
301 aatatttcct tcatggatac tttttcatag cattattatg tgatgtgaga agtttttttt
361 ttttgaagta acatggattt tatactacag aatcaagaga attggcttat aggaaaaatt
421 gatttataaa aagtggtaca ggttttcata gataaccatg acaacatccc atatgaatgg
481 gcatgttaca gaggaatcag acagcgaagt aaaaaatgtt gatcttgcat caccagagga
541 acatcagaat caccgagaga tggctgttga ctgccctgga gatttgggca ccaggatgat
601 gccaatacgt cgaagtgcac agttggagcg tattcggcaa caacaggagg acatgaggcg
661 taggagagag gaagaaggga aaaagcaaga acttgacctt aattcttcca tgagacttaa
721 gaaactagcc caaattcctc caaagaccgg aatagataac cctatgtttg atacagagga
781 aggaattgtc ttagaaagtc ctcattatgc tgtgaaaata ttagaaatag aagacttgtt
841 ttcttcactt aaacatatcc aacatacttt ggtagattct cagagccagg aggatatttc
901 actgctttta caacttgttc aaaataagga tttccagaat gcatttaaga tacacaatgc
961 catcacagta cacatgaaca aggccagtcc tccatttcct cttatctcca acgcacaaga
1021 tcttgctcaa gaggtacaaa ctgttttgaa gccagttcat cataaggaag gacaagaact
1081 aactgctttg ctgaatactc cacatattca ggcactttta ctggcccacg ataaggttgc
1141 tgagcaggaa atgcagctag agcccattac agatgagaga gtttatgaaa gtattggcca
1201 gtatggagga gaaactgtaa aaatagttcg tatagaaaag gctcgtgata ttccgttggg
1261 tgctacagtt cgtaatgaaa tggactctgt catcattagc cggatagtaa aagggggtgc
1321 tgcagagaaa agtggtctgt tgcatgaagg agatgaagtt ctagagatta atggcattga
1381 aattcggggg aaagatgtca atgaggtttt tgacttgttg tctgatatgc atggtacttt
1441 gacttttgtc ctgattccca gtcaacagat caagccgcct cctgccaagg aaacagtaat
1501 ccatgtaaaa gctcattttg actatgaccc ctcagatgac ccttatgttc catgtcgaga
1561 gttaggtctg tcttttcaaa aaggtgatat acttcatgtg atcagtcaag aagatccaaa
1621 ctggtggcag gcctacaggg aaggggacga agataatcaa cctctagccg ggcttgttcc
1681 agggaaaagc tttcagcagc aaagggaagc catgaaacaa accatagaag aagataagga
1741 gccagaaaaa tcaggaaaac tgtggtgtgc aaagaagaat aaaaagaaga ggaaaagggt
1801 tttatataat gccaataaaa atgatgacta tgacaacgag gagatcttaa cctatgagga
1861 aatgtcactt tatcatcagc cagcaaatag gaagagacct atcatcttga ttggtccaca
1921 gaactgtggc cagaatgaat tgcgtcagag gctcatgaac aaagaaaagg accgctttgc
1981 atctgcagtt cctcatacaa cccggagtag gcgagaccaa gaagtagccg gtagagatta
2041 ccactttgtt tcgcggcaag cattcgaggc agacatagca gctggaaagt tcattgagca
2101 tggtgaattt gagaagaatt tgtatggaac tagcatagat tctgtacggc aagtgatcaa
2161 ctctggcaaa atatgtcttt taagtcttcg tacacagtca ttgaagactc tccggaattc
2221 agatttgaaa ccatatatta tcttcattgc acccccttca caagaaagac ttcgggcatt
2281 attggccaaa gaaggcaaga atccaaagcc tgaagagttg agagaaatca ttgagaagac
2341 aagagagatg gagcagaaca atggccacta ctttgatacg gcaattgtga attccgatct
2401 tgataaagcc tatcaggaat tgcttaggtt aattaacaaa cttgatactg aacctcagtg
2461 ggtaccatcc acttggctga ggtgaaagaa acatccattc tgtggcatgt tggacttgat
2521 ctggcaaaaa ctgccaatag gaggactgcc cgacactgca gcaagattga ggataagatg
2581 gaaggcagca gtataagctg tagatctgtt cttagatctc ttgaattagt gagacgacag
2641 ttcccttagg cagtttgtgc atggcatcct ttattctcta tacatggctt tagcggttct
2701 tgcctcattt tgggattcta aatggaagct ttcaacagag cattccattt tgtcctgtta
2761 aaa
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