LOCUS AK291229 2774 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75683 complete cds, highly similar to Homo
sapiens TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 100kDa (TAF5), mRNA.
ACCESSION AK291229
VERSION AK291229.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2774)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2774
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8002659"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424026"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 38..2440
/codon_start=1
/note="highly similar to Homo sapiens TAF5 RNA polymerase
II, TATA box binding protein (TBP)-associated factor,
100kDa (TAF5), mRNA"
/protein_id="BAF83918.1"
/transl_table=1
/translation="MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGP
NGGGGNVAASSSTGGDGGTPKPTVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQ
FLRQSKLREAEEALRREAGLLEEAVAGSGAPGEVDSAGAEVTSALLSRVTASAPGPAA
PDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYY
SGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQ
DDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQ
EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEE
GENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKR
VRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVK
QASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT
VRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA
GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR
FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA
IKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYS
PQ"
BASE COUNT 758 a 603 c 726 g 687 t
ORIGIN
1 aatcacgctt gacggcgcga ggtggctcag ccgcaagatg gcggcgctgg cggaggaaca
61 gacggaggtg gcggtcaagc tagagcctga gggaccgcca acgctgctac ctccgcaggc
121 gggggacggc gcaggcgagg gtagcggcgg cactaccaac aacggcccca acggcggcgg
181 cgggaacgtt gcggcgtcgt cgtccactgg cggggatggc gggaccccca agcccacggt
241 ggctgtctcc gccgctgccc cggcgggggc ggccccggtg cccgccgctg ctccggacgc
301 cggcgctccg catgaccgac agactctact ggccgtgctg cagttcctac ggcagagcaa
361 actccgcgag gccgaagagg cgctgcgccg tgaggccggg ctgctggagg aggcagtggc
421 gggctccgga gccccgggag aggtggacag cgccggcgct gaggtgacca gcgcgcttct
481 cagccgggtg accgcctcgg cccctggccc tgcggccccc gaccctccgg gcactggcgc
541 ttcgggggcc acggtcgtct caggttcagc ctcaggtcct gcggctccgg gtaaagttgg
601 aagtgttgct gtggaagacc agccagatgt cagtgccgtg ttgtcagcct acaaccaaca
661 aggagatccc acaatgtatg aagaatacta tagtggactg aaacacttca ttgaatgttc
721 cctggactgc catcgggcag agttgtccca acttttttat cctctgtttg tgcacatgta
781 cttggagcta gtctacaatc aacatgagaa tgaagcaaag tcattctttg agaagttcca
841 tggagatcag gaatgttatt accaggatga cctacgagta ttatctagtc ttaccaaaaa
901 ggaacacatg aaagggaatg agaccatgtt ggattttcga acaagtaaat ttgttctgcg
961 tatttcccgt gactcgtacc aactcttgaa gaggcatctt caggagaaac agaacaatca
1021 gatatggaac atagttcagg agcacctcta cattgacatc tttgatggga tgccgcgtag
1081 taagcaacag atagatgcga tggtgggaag tttggcagga gaggctaaac gagaggcaaa
1141 caaatcaaag gtattttttg gtttattaaa agaaccagaa attgaggtac ctttggatga
1201 cgaggatgaa gagggagaaa atgaagaagg aaaacctaaa aagaagaagc ctaaaaaaga
1261 tagtattgga tccaaaagca aaaaacaaga tcccaatgct ccacctcaga acagaatccc
1321 tcttcctgag ttgaaagatt cagataagtt ggataagata atgaatatga aagaaaccac
1381 caaacgagtg cgccttgggc cggactgctt accctccatt tgtttctata catttctcaa
1441 tgcttaccag ggtctcactg cagtggatgt cactgatgat tctagtctga ttgctggagg
1501 ttttgcagat tcaactgtca gagtgtggtc ggtaacaccc aaaaagcttc gtagtgtcaa
1561 acaagcatca gatcttagtc ttatagacaa agaatcagat gatgtcttag aaagaatcat
1621 ggatgagaaa acagcaagtg agttgaagat tttgtatggt cacagtgggc ctgtctacgg
1681 agccagcttc agtccggata ggaactatct gctttcctct tcagaggacg gaactgttag
1741 attgtggagc cttcaaacat ttacttgttt ggtgggatat aaaggacaca actatccagt
1801 atgggacaca caattttctc catatggata ttattttgtg tcagggggcc atgaccgagt
1861 agctcggctc tgggctacag accactatca gcctttaaga atatttgccg gccatcttgc
1921 tgatgtgaat tgtaccagat tccatccaaa ttctaattat gttgctacgg gctctgcaga
1981 cagaactgtg cggctctggg acgtcctgaa tggtaactgt gtaaggatct tcactggaca
2041 caagggacca attcattcct tgacattttc tcccaatggg agattcctgg ctacaggagc
2101 aacagatggc agagtgcttc tttgggatat tggacatggt ttgatggttg gagaattaaa
2161 aggccacact gatacagtct gttcacttag gtttagtaga gatggtgaaa ttttggcatc
2221 aggttcaatg gataatacag ttcgattatg ggatgctatc aaagcctttg aagatttaga
2281 gaccgatgac tttactacag ccactgggca tataaattta cctgagaatt cacaggagtt
2341 attgttggga acatatatga ccaaatcaac accagttgta caccttcatt ttactcgaag
2401 aaacctggtt ctagctgcag gagcttatag tccacaataa accatcggta ttaaagacct
2461 tttggaagct actgttttta aaaagggaga ctaaaagcaa atacctcagt gattaatatt
2521 taagctacag agaatgtttt tgtctatatg gatctggaag tatgctgctt ggaaaaatct
2581 gaacaggaca gttccacgtt tctatagcaa ccacatttga ctaatttccg ttagttgaat
2641 aagaggtatt atgatcatgg aggggacatt tatggtgctt tggattgtgt ggaaactatg
2701 cattttctgt tcaaatgcta ttttaattta ttacatttag aaaaaaagtt gatttcaata
2761 attcatcctg cttc
//