LOCUS AK291228 3079 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ76829 complete cds, highly similar to Homo sapiens piggyBac transposable element derived 1 (PGBD1), mRNA. ACCESSION AK291228 VERSION AK291228.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3079) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3079 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP8002595" /clone_lib="NT2RP8" /db_xref="H-InvDB:HIT000424025" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 5-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 386..2815 /codon_start=1 /note="highly similar to Homo sapiens piggyBac transposable element derived 1 (PGBD1), mRNA" /protein_id="BAF83917.1" /transl_table=1 /translation="MYEALPGPAPENEDGLVKVKEEDPTWEQVCNSQEGSSHTQEICR LRFRHFCYQEAHGPQEALAQLRELCHQWLRPEMHTKEQIMELLVLEQFLTILPKELQP CVKTYPLESGEEAVTVLENLETGSGDTGQQASVYIQGQDMHPMVAEYQGVSLECQSLQ LLPGITTLKCEPPQRPQGNPQEVSGPVPHGSAHLQEKNPRDKAVVPVFNPVRSQTLVK TEEETAQAVAAEKWSHLSLTRRNLCGNSAQETVMSLSPMTEEIVTKDRLFKAKQETSE EMEQSGEASGKPNRECAPQIPCSTPIATERTVAHLNTLKDRHPGDLWARMHISSLEYA AGDITRKGKKKDKARVSELLQGLSFSGDSDVEKDNEPEIQPAQKKLKVSCFPEKSWTK RDIKPSFPSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSL EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFA DNGHLDQKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMCECFDSDQFLNGKPIRI GYKIWCGTTTQGYLVWFEPYQEESTMKVDEDPDLGLGGNLVMNFADVLLERGQYPYHL CFDSFFTSVKLLSALKKKGVRATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRVEENN EIILCRWYGDGIISLCSNAVGIEPVNEVSCCDADNEEIPQISQPSIVKVYDECKEGVA KMDQIISKYRVRIRSKKWYSILVSYMIDVAMNNAWQLHRACNPGASLDPLDFRRFVAH FYLEHNAHLSD" BASE COUNT 923 a 633 c 759 g 764 t ORIGIN 1 gtacccgccc agctgctgga ggcgccggca gcgcccgcca gacccgccag cccagcggcc 61 cgggctctgg ggaaaccggc gctcccgaca ggggagcacc gggcctctga gctccctcgg 121 gagcctttca cgaggtcagc tacgtctttg ttgtgcgcgt tcctgaactt ttggtccatt 181 aaccaacaat tagacacgcc ggtattcagt gcctggcgcg gtgctagatg ctgggtgtaa 241 tctcagaaaa atacattcag gggcgcgcct gagggtgctg gctgctggca tctcaggtgc 301 tttacgtgca ttcgtgaaga agcccatcag tatttcttga ataccagacc ccaagctaag 361 tgaagcttta gcctctaagc tcaacatgta tgaagctttg ccaggccctg ctcctgaaaa 421 tgaagatggc cttgtgaaag tgaaggagga agatcccacc tgggagcagg tgtgcaactc 481 acaggagggc agctcccaca ctcaggagat ttgccgcctg cgctttcggc acttctgcta 541 ccaggaggct cacggacccc aggaagctct ggcccaactc cgagaacttt gtcatcaatg 601 gctgagaccg gagatgcaca ccaaggaaca gataatggaa ctgctggtgc tggagcagtt 661 cctgaccatc ctgcccaagg agctccagcc ctgtgtgaag acatatcctc tggagagtgg 721 agaggaggca gtgacagtgc tggagaatct agagacagga agtggagaca caggacaaca 781 ggcctctgtc tatattcagg gacaggacat gcacccaatg gtggcagaat atcaaggagt 841 ctctttggag tgtcagagcc tccagctcct gcctgggata accaccctga agtgtgaacc 901 tccacagcgt cctcaaggga acccccaaga agtgagtggg cctgttcccc acggatcagc 961 tcatctccag gaaaaaaacc ccagagacaa ggctgtagtg cctgtgttta acccagtcag 1021 gtcccagaca ttggtgaaga ctgaggaaga aacagcccag gccgttgctg cagagaagtg 1081 gtcacatctg agtctgactc ggaggaacct ctgtgggaac tcagctcagg agacagttat 1141 gagcctcagt ccgatgactg aagaaattgt aactaaagat agattgttta aagcaaagca 1201 agaaacttct gaagaaatgg aacaaagtgg agaagcctca ggaaagccca acagagagtg 1261 tgcaccccag attccttgta gtactcctat tgctactgaa aggacagttg cacatttgaa 1321 cactctgaag gaccgtcacc caggtgattt gtgggcccgc atgcacatct catccctgga 1381 atatgctgca ggagacatta cccgaaaagg gaaaaaaaaa gacaaagctc gagtgagtga 1441 actgctccaa ggcctctcat tctctggtga ctcagatgtg gaaaaagata atgagcctga 1501 gatccagcct gctcaaaaga agttaaaggt atcatgtttc ccagaaaaga gttggaccaa 1561 aagagacatt aaacccagtt ttccaagctg gtcagcactg gattctggac ttttgaatct 1621 caagagcgaa aagttgaacc cagtagagct ttttgaatta ttttttgatg atgaaacatt 1681 caacttaatt gtcaatgaaa ccaataatta tgcttctcag aaaaatgtca gcttggaagt 1741 cacagttcag gaaatgaggt gtgtgtttgg tgtcttactt ttgagtggat ttatgaggca 1801 tcctagaagg gaaatgtatt gggaagtctc tgacaccgat cagaacctgg ttagagatgc 1861 aatcagaagg gacagatttg aattgatttt ctcaaacctg cactttgcag ataatggcca 1921 cctagatcaa aaagataagt ttacaaagtt gagacctctc ataaaacaaa tgaataaaaa 1981 tttcctcttg tatgctcccc tggaagaata ctattgcttt gataagtcaa tgtgtgaatg 2041 ctttgatagt gaccaattcc tgaatggaaa gcctattaga attggctata aaatttggtg 2101 tggtacaacc acacagggtt atctggtttg gtttgaaccc tatcaagaag aatcaactat 2161 gaaggtagat gaggatcctg atcttgggtt aggtggaaat ctagtgatga acttcgctga 2221 tgttctttta gagagaggtc agtatcccta tcacctgtgt tttgatagct tctttacaag 2281 tgtcaaattg ttgtcagcct tgaaaaagaa gggggtgagg gcaacaggaa caattcgtga 2341 gaacaggacc gaaaaatgtc cccttatgaa tgtagaacat atgaaaaaaa tgaagagagg 2401 gtattttgat ttccgagtag aagaaaacaa tgagataatt ttgtgtcgtt ggtatgggga 2461 tggcattatc agtctgtgct ccaatgctgt gggcatagaa ccagtcaatg aggtaagctg 2521 ttgtgatgct gataacgaag aaatccctca gataagtcaa ccatccatag taaaagtgta 2581 tgatgaatgc aaggaaggtg tagctaaaat ggatcaaatt atttcgaaat acagggtgag 2641 gataagaagc aagaaatggt actcaatttt ggtgagctac atgattgatg tagccatgaa 2701 caatgcatgg caactacaca gagcctgtaa cccaggtgct tctctagacc ccttggattt 2761 tcggagattt gttgcacatt tctacttgga acacaatgct catctgtcag attagggtac 2821 ataaaatgga catagtgcag acattaataa gacatagaaa aataataatt atacatgctg 2881 ttgtaccctc ccaaagtaaa tctgatatat gtaatgaagt tattaaataa tacttttaaa 2941 aatcagacat ttatatagag tttcaaagac tattgtaaca agtaatgtta aaaattgtct 3001 gtgagaatgt tgaactgtag tacctttctc tatgtcaagt tttgtgtcag acatgggaaa 3061 tcatgtattt gttcaattg //