LOCUS AK291203 1450 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76823 complete cds, highly similar to Homo
sapiens splicing factor, arginine/serine-rich 6 (SFRS6), mRNA.
ACCESSION AK291203
VERSION AK291203.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1450)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1450
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8000903"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000424000"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 139..1173
/codon_start=1
/note="highly similar to Homo sapiens splicing factor,
arginine/serine-rich 6 (SFRS6), mRNA"
/protein_id="BAF83892.1"
/transl_table=1
/translation="MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFED
SRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKY
GPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMK
RALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRS
ISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRS
RSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKS
RSRSRSSSGD"
BASE COUNT 383 a 361 c 375 g 331 t
ORIGIN
1 attgtgtggc tggactcggc cgcccctgtg gtgtgaggcg cgtgttcggg ctcttgccgt
61 ccccgcaccc gcaccgcggt tactggcttg cggtccgccg ttcgacaacc agcccttggg
121 tccccgcccg ccacggacat gccgcgcgtc tacataggac gcctgagcta caacgtccgg
181 gagaaggaca tccagcgctt tttcagtggc tatggccgcc tcctcgaagt agacctcaaa
241 aatgggtacg gcttcgtgga gttcgaggac tcccgcgacg ccgacgacgc cgtttacgag
301 ctgaacggca aggagctctg cggcgagcgc gtgatcgtag agcacgcccg gggcccgcgt
361 cgcgatcgcg acggctacag ctacggaagc cgcagtggtg gaggtggata cagcagtcgg
421 agaacatctg gcagagacaa atacggacca cctgttcgta cagaatacag gcttattgta
481 gaaaatcttt ctagtcggtg cagttggcaa gatttaaagg attttatgcg acaagcaggt
541 gaagtaacct atgcggatgc ccacaaggaa cgaacaaatg agggtgtaat tgagtttcgc
601 tcctactctg acatgaagcg tgctttggac aaactggatg gcacagaaat aaatggcaga
661 aatattaggc ttattgaaga taagccacgc acaagccata ggcgatctta ctctggaagc
721 agatccaggt ctcgatctag aagacggtca cgaagtagga gtcgcaggag cagccgcagt
781 agatctcgaa gtatctcaaa aagtcgctcc cgttccaggt cgcggagcaa aggtcgatca
841 cgttctcgat caaaaggcag gaaatctaga tcaaagagca aatctaagcc caagtctgat
901 cggggctccc attcacattc tcgaagcaga tctaaggatg agtatgagaa atctcgaagc
961 aggtctcggt cccgatcccc caaagaaaat ggaaagggtg atataaagtc aaaatccaga
1021 tcaaggagcc agtcccgttc caattcgccg ctacctgttc caccctcaaa ggcccgttct
1081 gtgtcccctc caccaaaaag agctacttca agatcccgtt ctagatctcg ctcaaagtca
1141 agatcaaggt ccaggtcgag ttccggagat taactcagaa ctccttgttt gcacattatt
1201 atggaacact ttcctactta ggcagttact cttccatgtt tatacttggc ctcttctgca
1261 agaggaatct cttgaaaaca ggggcacaca gaaatttgat ttgtggccaa attggatgaa
1321 aaagatgagg ctctaaggaa atggtggcat gaagaccctc tcccttcttt gtagaattaa
1381 gataactttg attttatagc ttttgagcta acgtaacttt tgtaaagatt aagctcattt
1441 agtgttgttt
//