LOCUS AK291201 3645 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76822 complete cds, highly similar to Homo
sapiens adaptor-related protein complex 3, beta 1 subunit (AP3B1),
mRNA.
ACCESSION AK291201
VERSION AK291201.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3645)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3645
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8000728"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000423998"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 118..3402
/codon_start=1
/note="highly similar to Homo sapiens adaptor-related
protein complex 3, beta 1 subunit (AP3B1), mRNA"
/protein_id="BAF83890.1"
/transl_table=1
/translation="MSSNSFPYNEQSGGGEATELGQEATSTISPSGAFGLFSSDLKKN
EDLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYL
VRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSGIRVPIIVPIMMLAIKEASA
DLSPYVRKNAAHAIQKLYSLDPEQKEMLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDR
IDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRYARTQFVSPWKEGDELEDNGKNFYES
DDDQKEKTDKKKKPYTMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPKSEAGI
ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEI
LTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLL
SNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARAGILWLIGENCE
RVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ
NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSH
TLNIKATGYLELSNWPEVAPDPSVRNVEVIELAKEWTPAGKAKQENSAKKFYSESEEE
EDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTA
KRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVT
KEKEKKTKQDRTPLTKDVSLLDLDDFNPVSTPVALPTPALSPSLMADLEGLHLSTSSS
VISVSTPAFVPTKTHVLLHRMSGKGLAAHYFFPRQPCIFGDKMVSIQITLNNTTDRKI
ENIHIGEKKLPIGMKMHVFNPIDSLEPEGSITVSMGIDFCDSTQTASFQLCTKDDCFN
VNIQPPVGELLLPVAMSEKDFKKEQGVLTGMNETSAVIIAAPQNFTPSVIFQKVVNVA
NVGAVPSGQDNIHRFAAKTVHSGSLMLVTVELKEGSTAQLIINTEKTVIGSVLLRELK
PVLSQG"
BASE COUNT 1151 a 724 c 814 g 956 t
ORIGIN
1 aagcgcctgc gcgcgctcct ccgtacgaga actagttttg ttccgtgccc tctggactgg
61 aaccttttgg agagaacccc cggcaggacc aaccccgcac ccgccagcac cgcggcaatg
121 tccagcaata gttttcctta caatgagcag tccggaggag gggaggcgac ggagctgggt
181 caggaggcga cctcaaccat ttccccctcg ggggccttcg gcctctttag cagcgatttg
241 aagaagaatg aagatctaaa gcaaatgtta gagagcaaca aagattctgc taaactggat
301 gctatgaagc ggattgttgg gatgattgca aaagggaaaa atgcatctga actgtttcct
361 gctgttgtga agaatgtggc cagtaaaaat attgagatca agaagttggt atatgtttac
421 ctggttcgat atgctgaaga acagcaggat cttgcactcc tgtccataag cacttttcag
481 cgagctctga aggacccaaa ccaactaatt cgtgcaagcg ctttgagagt tctgtcaggt
541 attagagtgc caattattgt acctatcatg atgcttgcta ttaaggaagc ttctgctgac
601 ttatcaccat atgttaggaa gaatgcagcc catgcaatac aaaaattata cagccttgat
661 ccagagcaga aggaaatgtt aattgaagta attgaaaaac ttctgaaaga taaaagcaca
721 ttggtagctg gcagtgttgt gatggctttt gaagaagtat gcccggacag aatagatctg
781 attcataaaa attaccgcaa gctatgtaac ttactagtgg atgttgaaga gtgggggcag
841 gttgtcataa tccacatgct aactcgatat gctcggacac agtttgtcag cccttggaaa
901 gagggtgatg aattagaaga caatggaaag aatttctacg aatctgatga tgatcagaag
961 gaaaagactg acaaaaagaa gaagccgtat actatggatc cagatcatag actcttaatt
1021 agaaatacaa agcctttgct tcagagcagg aatgctgcgg tggttatggc agttgctcag
1081 ctgtattggc acatatcacc aaaatctgaa gctggcataa tttctaaatc actagtgcgt
1141 ttacttcgta gcaataggga ggtgcagtat attgtcctac aaaatatagc aactatgtca
1201 attcaaagaa aggggatgtt tgaaccttat ctgaagagtt tctatgttag gtcaactgat
1261 ccaactatga tcaagacact gaagcttgaa attttgacaa acttggcaaa tgaagccaac
1321 atatcaactc ttcttcgaga atttcagacc tatgtgaaaa gccaggataa acaatttgca
1381 gcagccacta ttcagactat aggcagatgt gcaaccaaca tcttggaagt cactgacacg
1441 tgcctcaatg gcttggtctg tctgctgtcc aacagggatg aaatagttgt tgctgaaagt
1501 gtggttgtta taaagaaatt actgcaaatg caacctgcac aacatggtga aattattaaa
1561 catatggcca aactcctgga cagtatcact gttcctgttg ctagagcagg tattctttgg
1621 ctaattggag aaaactgtga acgagttcct aaaattgccc ctgatgtttt gaggaagatg
1681 gctaaaagct tcactagtga agatgatctg gtaaaactgc agatattaaa tctgggagca
1741 aaattgtatt taaccaactc caaacagaca aaattgctta cccagtacat attaaatctc
1801 ggcaagtatg atcaaaacta cgacatcaga gaccgtacaa gatttattag gcagcttatt
1861 gttccgaatg aaaagagtgg agctttaagt aaatatgcca aaaaaatatt cctagcacaa
1921 aagcctgcac cactgcttga gtctcctttt aaagatagag atcatttcca gcttggcacc
1981 ttatctcata ctctcaacat taaagctact gggtacctgg aattatctaa ttggccagag
2041 gtggcgcccg acccatcagt tcgaaatgta gaagtaatag agttggcaaa agaatggacc
2101 ccagcaggaa aagcaaagca agagaattct gctaagaagt tttattctga atctgaggaa
2161 gaggaggact cttctgatag tagcagtgac agtgagagtg aatctggaag tgaaagtgga
2221 gaacaaggcg aaagtgggga ggaaggagac agcaatgagg acagcagtga ggactcctcc
2281 agtgagcagg acagtgagag tggacgggag tcaggcctag aaaacaaaag aacagccaag
2341 aggaactcaa aagccaaagg aaaaagtgat tctgaagatg gggagaagga aaatgaaaaa
2401 tctaaaactt cagattcttc aaatgacgaa tctagttcaa tagaagacag ttcttccgat
2461 tctgaatcag agtcagaacc tgaaagtgaa tctgaatcca gaagagtcac taaggagaaa
2521 gaaaagaaaa caaagcaaga tagaactcct cttaccaaag atgtttcact tctagatctg
2581 gatgatttta acccagtatc cactccagtt gcacttccca caccagctct ttctccaagt
2641 ttgatggctg atcttgaagg tttacacttg tcaacttcct cttcagtcat cagtgtcagt
2701 actcctgcat ttgtaccaac gaaaactcac gtgctgcttc atcgaatgag tggaaaagga
2761 ctagctgccc attatttctt tccaagacag ccttgcattt ttggtgataa gatggtctct
2821 atacaaataa cactgaataa cactactgat cgaaagatag aaaatatcca cataggggaa
2881 aaaaaacttc ctataggcat gaaaatgcat gtttttaatc caatagactc tcttgagcct
2941 gagggatcca ttacagtttc aatgggtatt gacttttgtg attctactca gactgccagt
3001 ttccagttgt gtaccaagga tgattgcttc aatgttaata ttcagccacc tgttggagaa
3061 ctgcttttac ctgtggccat gtcagagaaa gattttaaga aagagcaagg agtgctaaca
3121 ggaatgaatg aaacttctgc tgtaatcatt gctgcaccac agaatttcac tccctctgtg
3181 atctttcaga aggttgtaaa tgtagccaat gtaggtgcag tcccttctgg ccaggataat
3241 atacacaggt ttgcagctaa aactgtgcac agtgggtcat tgatgctagt cacagtggaa
3301 ctgaaggaag gctctacagc ccagcttatc ataaacactg agaaaactgt gattggctct
3361 gttctgctgc gggaactgaa gcctgtcctg tctcaggggt aacctgctta catctggact
3421 ttagaatctg gcacacaaca aaagtgcctg gcatccacta ctgctgcctt tcatttataa
3481 taatagccct tccatctggc agtgggggaa gaatacactc ttgacattct tgtctcctgc
3541 tttagaatgc tagtgtgtat ctatcatgta tgcaatactt tccccctttt tgctttgcta
3601 accaaagagc atatatttta ctgtcagttg tctcaactct tgaat
//