LOCUS AK291175 1694 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78017 complete cds, highly similar to Homo sapiens ceroid-lipofuscinosis, neuronal 6, late infantile, variant, mRNA. ACCESSION AK291175 VERSION AK291175.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1694) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1694 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP7013752" /clone_lib="NT2RP7" /db_xref="H-InvDB:HIT000423972" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 5-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 86..1021 /codon_start=1 /note="highly similar to Homo sapiens ceroid-lipofuscinosis, neuronal 6, late infantile, variant, mRNA" /protein_id="BAF83864.1" /transl_table=1 /translation="MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFH LDLWFYFTLQNWVLDFGRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIE RSPRTLPRSITYVSIIIFIMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPE TLIDSFELLYYYDEYLGHCMWYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSG LYYWYLVTEGQIFILFIFTFFAMLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALW VAWLWNDPVLRKKYPGVIYVPEPWAFYTLHVSSRH" BASE COUNT 272 a 530 c 472 g 420 t ORIGIN 1 aatttgcggc ggcctccgcc ggggcagccg agctgaaccg gtctcttcct cggaaaggca 61 gggccgaggg gcctgcgggg cagccatgga ggcgacgcgg aggcggcagc acctgggagc 121 gacgggcggc ccaggcgcgc agctgggcgc ctccttcctg caggccaggc atggctctgt 181 gagcgctgat gaggctgccc gcacggctcc cttccacctc gacctctggt tctacttcac 241 actgcagaac tgggttctgg actttgggcg tcccattgcc atgctggtat tccctctcga 301 gtggtttcca ctcaacaagc ccagtgttgg ggactacttc cacatggcct acaacgtcat 361 cacgcccttt ctcttgctca agctcatcga gcggtccccc cgcaccctgc cacgctccat 421 cacgtacgtg agcatcatca tcttcatcat gggtgccagc atccacctgg tgggtgactc 481 tgtcaaccac cgcctgctct tcagtggcta ccagcaccac ctgtctgtcc gtgagaaccc 541 catcatcaag aatctcaagc cggagacgct gatcgactcc tttgagctgc tctactatta 601 tgatgagtac ctgggtcact gcatgtggta catccccttc ttcctcatcc tcttcatgta 661 cttcagcggc tgctttactg cctctaaagc tgagagcttg attccagggc ctgccctgct 721 cctggtggca cccagtggcc tgtactactg gtacctggtc accgagggcc agatcttcat 781 cctcttcatc ttcaccttct tcgccatgct ggccctcgtc ctgcaccaga agcgcaagcg 841 cctcttcctg gacagcaacg gcctcttcct cttctcctcc ttcgcactga ccctcttgct 901 tgtggcgctc tgggtcgcct ggctgtggaa tgaccctgtt ctcaggaaga agtacccggg 961 tgtcatctac gtccctgagc cctgggcttt ctacaccctt cacgtcagca gtcggcactg 1021 agtccctggc accaggctct ggcgctctgc tgggtgggag ggtgggccat ggagggcatc 1081 tgaatacagg agtagggggg gtgtgggtgt gtaaccagag accgagagca tgagtggggt 1141 gtgcctcgtg tgcgtggatt cgtgtgtgtg tgtgtgtctt gtatatgtgt gcgcagagtg 1201 catcattttc agactctact atttccgtca agtttctgtt tgatttggat cacctcagga 1261 tcggattctg ttttagagtg tttctgggcc aggatccggg cccctgccct cctctgcacc 1321 tgaccacact ccctactcag ggctagtctg ttcttcccgg acatcttctg gtagccgtgc 1381 aggagagggc tgggtggggc agaggccagg aggggacctg gtgtgtcacc tgcccaccac 1441 ctggctcatc cctcaggccc accctgaccc tacattacat aggttacgtc agcctactgt 1501 ggctgttgag caaagcattt ctcctttctg ggcctcattt gcactagatg ggcctgtggt 1561 cccaaagtag gtcagtaggt tggggttgct gacacccctt gggtgcagct ttgggacaga 1621 tgagtggctc tgtcctgtca ctgccctctc cctgcctggg ggctatgtgc actccagacc 1681 cctgcccagg ctca //