LOCUS AK291165 2276 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77124 complete cds, highly similar to Homo
sapiens somatostatin receptor 3 (SSTR3), mRNA.
ACCESSION AK291165
VERSION AK291165.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2276)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2276
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007509"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000423962"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 585..1841
/codon_start=1
/note="highly similar to Homo sapiens somatostatin
receptor 3 (SSTR3), mRNA"
/protein_id="BAF83854.1"
/transl_table=1
/translation="MDMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSG
VLIPLVYLVVCVVGLLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAA
QNALSYWPFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVA
RTVSAAVWVASAVVVLPVVVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGP
LLVICLCYLLIVVKVRSAGRRVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVL
NIVNVVCPLPEEPAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRR
VRSQEPTVGPPEKTEEEDEEEEDGEESREGGKGKEMNGRVSQITQPGTSGQERPPSRV
ASKEQQLLPQEASTGEKSSTMRISYL"
BASE COUNT 349 a 733 c 712 g 482 t
ORIGIN
1 ctgcatctct ccctctcacc cgtgtctcct ctcctctctt tccttctcgt cttctccctg
61 tcacgcatct ctcatcactc cccctcattc tgcctttcct cctactcacg ggcatctctc
121 cctctctctc tctctctccc cctccctctt tctctctctc tctttctcca cctcctcccg
181 accccctttc ccctctattt ctattggctt ctgtgtccct tgctcccctc ttctcttcct
241 caccctggga agcttctccc ccctatcctt gcccctgccc ccccaggatg tgtcctggag
301 atggggggtg acgtaccagg ctctggttgg gaagtcaggg ccggagacca gatgggagag
361 gctctgtgga cagccgtggc cgagggcctg ggagggaacc tgagcccgca agcggtctag
421 aagtgggtgc cgtgtgggga ccctagttag gagtgccctg ggggcacctg gggactgggc
481 agggagaggg gacagcagaa tgataaccag cctggcggca aggagggaag ccctcacccc
541 atgggcaggc aaatagctga ctgctgacca ccctcccctc agccatggac atgcttcatc
601 catcatcggt gtccacgacc tcagaacctg agaatgcctc ctcggcctgg cccccagatg
661 ccaccctggg caacgtgtcg gcgggcccaa gcccggcagg gctggccgtc agtggcgttc
721 tgatccccct ggtctacctg gtggtgtgcg tggtgggcct gctgggtaac tcgctggtca
781 tctatgtggt cctgcggcac acggccagcc cttcagtcac caacgtctac atcctcaacc
841 tggcgctggc cgacgagctc ttcatgctgg ggctgccctt cctggccgcc cagaacgccc
901 tgtcctactg gcccttcggc tccctcatgt gccgcctggt catggcggtg gatggcatca
961 accagttcac cagcatattc tgcctgactg tcatgagcgt ggaccgctac ctggccgtgg
1021 tacatcccac ccgctcggcc cgctggcgca cagctccggt ggcccgcacg gtcagcgcgg
1081 ctgtgtgggt ggcctcagcc gtggtggtgc tgcccgtggt ggtcttctcg ggagtgcccc
1141 gcggcatgag cacctgccac atgcagtggc ccgagccggc ggcggcctgg cgagccggct
1201 tcatcatcta cacggccgca ctgggcttct tcgggccgct gctggtcatc tgcctctgct
1261 acctgctcat cgtggtgaag gtgcgctcag ctgggcgccg ggtgtgggca ccctcgtgcc
1321 agcggcggcg gcgctccgaa cgcagggtca cgcgcatggt ggtggccgtg gtggcgctct
1381 tcgtgctctg ctggatgccc ttctacgtgc tcaacatcgt caacgtggtg tgcccactgc
1441 ccgaggagcc tgccttcttt gggctctact tcctggtggt ggcgctgccc tatgccaaca
1501 gctgtgccaa ccccatcctt tatggcttcc tctcctaccg cttcaagcag ggcttccgca
1561 gggtcctgct gcggccctcc cgccgtgtgc gcagccagga gcccactgtg gggcccccgg
1621 agaagactga ggaggaggat gaggaggagg aggatgggga ggagagcagg gaggggggca
1681 aggggaagga gatgaacggc cgggtcagcc agatcacgca gcctggcacc agcgggcagg
1741 agcggccgcc cagcagagtg gccagcaagg agcagcagct cctaccccaa gaggcttcca
1801 ctggggagaa gtccagcacg atgcgcatca gctacctgta ggggcctggg gaaagccagg
1861 atggcccgag gaagaggcag aagccgtggg tgtgcctagg gcctacttcc caaggtgcca
1921 caggcccatg atgggatgtt gaggggcctg gactttgatg ctattgctgc caggtcttgc
1981 tgtgtgacct tgggtaggtt gcttctactc tctgggcctt gttttctcct ctgtgactca
2041 gggataggag tcatcagcct ggatgagcta tgtcagatga gaggtttgga gggcactgtt
2101 gctgggctga cctggctgag caggcaaaag gtgggtgcag actggcctcc ccccagggat
2161 ggagtgtctt ggggcatcaa ctagaatctt ggccctcaga gggataaacc aaggccagga
2221 tttcttgggc tcagagtcag gaacacagga gctgctgggg gctgggctgg aaacct
//