LOCUS AK291155 1618 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78574 complete cds.
ACCESSION AK291155
VERSION AK291155.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1618)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1618
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP6000240"
/clone_lib="NT2RP6"
/db_xref="H-InvDB:HIT000423952"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 12..1253
/codon_start=1
/protein_id="BAF83844.1"
/transl_table=1
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATEDAEG
GDGPRLPQRSKFDSDEEEEDTENVEAASSGKVTRSPSPVPQEEHSDPEMTEEEKEYQM
MLLTKMLLTEILLDVTDEEIYYVAKDAHRKATKGIFWCFWFCFSWGILVLMTILAFFC
CPCWISTRYLNILLHVLTLKD"
BASE COUNT 515 a 335 c 346 g 422 t
ORIGIN
1 taaaagaagg gatgtgggat caaggaggac agccttggca gcagtggccc ttgaaccagc
61 aacaatggat gcagtcattc cagcaccaac aggatccaag ccagattgat tgggctgcat
121 tggcccaagc ttggattgcc caaagagaag cttcaggaca gcaaagcatg gtagaacaac
181 caccaggaat gatgccaaat ggacaagata tgtctacaat ggaatctggt ccaaacaatc
241 atgggaattt ccaaggggat tcaaacttca acagaatgtg gcaaccagaa tggggaatgc
301 atcagcaacc cccacacccc cctccagatc agccatggat gccaccaaca ccaggcccaa
361 tggacattgt tcctccttct gaagacagca acagtcagga cagtggggaa tttgcccctg
421 acaacaggca tatatttaac cagaacaatc acaactttgg tggaccaccc gataattttg
481 cagtggggcc agtgaaccag tttgactatc agcatggggc tgcttttggt ccaccgcaag
541 gtggatttca tcctccttat tggcaaccag gacctccagg acctccagca cctccccaga
601 atcgaagaga aaggccatca tcattcaggg atcgtcagcg ttcacctatt gcacttcctg
661 tgaagcagga gcctccacaa attgacgcag taaaacgcag gactcttccc gcttggattc
721 gcgaaggtct tgaaaaaatg gaacgtgaaa agcagaagaa attggagaaa gaaagaatgg
781 aacaacaacg ttcacaattg tccaaaaaag aaaaaaaggc cacagaagat gctgaaggag
841 gggatggccc tcgtttacct cagagaagta aatttgatag tgatgaggaa gaagaagaca
901 ctgaaaatgt tgaggctgca agtagtggga aagtcaccag aagtccatcc ccagttcctc
961 aagaagagca cagtgaccct gagatgactg aagaggagaa agagtatcaa atgatgttgc
1021 tgacaaaaat gcttctaaca gaaattctgc tggatgtcac agatgaagaa atttattacg
1081 tagccaaaga tgcacaccgc aaagcaacga aaggtatatt ttggtgtttc tggttttgct
1141 tttcctgggg tattttggtt ctgatgacta ttttggcctt tttttgttgt ccttgttgga
1201 tttctaccag atatttgaat attctcttgc atgttttaac tcttaaagat tagattcgta
1261 gacaccatat taaagctata caaatatttt tgttttatct gacctacatg agtacaaatt
1321 agcaatcatg ctgttttcct ctaaaatgta ttgtggaaaa ttccaggtgt tcagtttatt
1381 tcacctgatt ttttttaata gataacatgg cattgttgtg tgacttctga tacagtttat
1441 tttgactaat gaattttgaa ttatctacct acaattttta gtttaccact tatctcttac
1501 agaagcaagt gatttcctac ccctagattt ttagtaacac cttaaaaatg tattgaaaac
1561 aaaaattaag ttacatgtca taatctcaga agtagacata cagatatacc tgtcgaca
//