LOCUS AK291154 1561 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75007 complete cds, highly similar to Homo
sapiens synaptotagmin IV (SYT4), mRNA.
ACCESSION AK291154
VERSION AK291154.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1561
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP6000126"
/clone_lib="NT2RP6"
/db_xref="H-InvDB:HIT000423951"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 210..1487
/codon_start=1
/note="highly similar to Homo sapiens synaptotagmin IV
(SYT4), mRNA"
/protein_id="BAF83843.1"
/transl_table=1
/translation="MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSK
SNKTPPYKFVHVLKGVDIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLN
GNFPKTNLKPGSPSDLENATPKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFS
LEYNFERKAFVVNIKGARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA
FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNRE
IIKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHA
KKRISKKKTHVKKCTPNAVFNELFVFGIPCEGLEDISVEFLVLDSERGSRNEVIGQLV
LGAAAEGTGGEHWKEICDYPRRQIAKWHVLCDG"
BASE COUNT 456 a 336 c 367 g 402 t
ORIGIN
1 agaagagcca aaacaggaac cgaggtggca aatcactgtg cgagggcgag tggacctccc
61 tctttgcctc ctccctgttc caggagctgg tgccctgggc tctgcgctgt tgttttcagc
121 gctccgaaag ccggcgcttg agatccaggc aagtgaatcc agccaggcag ttttcccttc
181 agcacctcgg acagaacacg cagtaaaaaa tggctccgat caccaccagc cgggaagaat
241 ttgatgaaat ccccacagtg gtggggatct tcagtgcatt tggcctggtc ttcacagtct
301 ctctctttgc atggatctgc tgtcagagaa aatcatccaa gtctaacaag actcctccat
361 acaagtttgt gcatgtgctt aagggagttg atatttaccc tgaaaaccta aatagcaaaa
421 agaagtttgg agcagatgat aaaaatgaag taaagaataa gccagccgtg ccaaagaatt
481 cattgcatct ggatcttgaa aagagagatc tcaatggcaa ttttcccaaa accaacctca
541 aacctggcag tccttctgat ctggagaatg caaccccgaa gctcttttta gaaggggaaa
601 aagagtcagt ttcccctgag agtttaaagt ccagcacttc ccttacttca gaagagaaac
661 aagagaagct gggaactctc ttcttctcct tagaatacaa cttcgagaga aaagcatttg
721 tggtcaatat caagggagcc cgtggcttgc cagccatgga tgagcagtcg atgacctctg
781 acccatatat caaaatgacg atcctcccag agaagaagca taaagtgaaa actagagtgc
841 tgagaaaaac cttggatcca gcttttgatg agacctttac attctatggg ataccctaca
901 cccaaatcca agaattggcc ttgcacttca caattttgag ttttgacagg ttttcaagag
961 atgatatcat tggggaagtt ctaattcctc tctcgggaat tgaattatct gaaggaaaaa
1021 tgttaatgaa tagagagatc atcaagagaa atgttaggaa gtcttcagga cggggtgagt
1081 tactgatctc tctctgctat cagtccacca caaacactct aactgtggtt gtcttaaaag
1141 ctcgacatct gcctaaatct gatgtgtccg gactttcaga tccctatgtc aaagtgaacc
1201 tgtaccatgc caaaaagaga atctccaaga agaagactca tgtgaagaaa tgcaccccca
1261 atgcagtgtt caatgagctg tttgtctttg gtattccttg tgagggcctt gaagatataa
1321 gtgttgaatt tttggttttg gattctgaaa gggggtcccg aaatgaggta atcgggcagt
1381 tagtcttggg tgcagcagca gaaggaactg gtggagagca ctggaaagag atctgtgact
1441 accccaggag acaaattgcc aagtggcacg tgctctgtga tggttagcat cctagccgtg
1501 agttggaact taaaggtttt tactaggcaa ggagaaattt tctttctttc tatattggat
1561 t
//