LOCUS AK291054 1373 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ77421 complete cds, highly similar to Homo sapiens autoantigen p542 mRNA. ACCESSION AK291054 VERSION AK291054.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1373) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1373 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3007969" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000423851" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 144..1019 /codon_start=1 /note="highly similar to Homo sapiens autoantigen p542 mRNA" /protein_id="BAF83743.1" /transl_table=1 /translation="MSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDVETIFSK YGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLK RAASAIYRLFDYRGRLSPVPVPRAVPVKRPRVTVPLVRCVKTNVPVKLFARSTAVTTS SAKIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKANPDGKKKGDGGGASGGG GGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTRDDGDEEGLLTHSEEE LEHSQDTDADDGALQ" BASE COUNT 307 a 415 c 418 g 233 t ORIGIN 1 agtaccgcct ccttcccagc cgcgcggctt cctccagacc tctcggcgcg ggtgagccct 61 attcccagag gcaggtggtg ctgaccctgt aacccaaagg aggaaacagc tggctaagct 121 catcattgtt actggtgggc accatgtcct tgaagcttca ggcaagcaat gtaaccaaca 181 agaatgaccc caagtccatc aactctcgag tcttcattgg aaacctcaac acagctctgg 241 tgaagaaatc agatgtggag accatcttct ctaagtatgg ccgtgtggcc ggctgttctg 301 tgcacaaggg ctatgccttt gttcagtact ccaatgagcg ccatgcccgg gcagctgtgc 361 tgggagagaa tgggcgggtg ctggccgggc agaccctgga catcaacatg gctggagagc 421 ctaagcctga cagacccaag gggctaaaga gagcagcatc tgccatatac aggctcttcg 481 actaccgggg ccgtctgtcg cccgtgccag tgcccagggc ggtccctgtg aagcgacccc 541 gggtcacagt ccctttggtc cggtgtgtca aaactaacgt acctgtcaag ctctttgccc 601 gctccacagc tgtcaccacc agctcagcca agatcaagtt aaagagcagt gagctgcagg 661 ccatcaagac ggagctgaca cagatcaagt ccaatatcga tgccctgctg agccgcttgg 721 agcagatcgc tgcggagcaa aaggccaatc cagatggcaa gaagaagggt gatggaggtg 781 gcgccagcgg cggcggcggc ggtggtggtg gcagcggtgg cggtggcagt ggtggtggcg 841 gtggcggtgg cagcagccgg ccaccagccc cccaagagaa cacaacttct gaggcaggcc 901 tgccccaggg ggaagcacgg acccgagacg acggcgatga ggaagggctc ctgacacaca 961 gcgaggaaga gctggaacac agccaggaca cagacgcgga tgatggggcc ttgcagtaag 1021 cagcctgaca ggagcaatgg ccaccagcag gtgaagggca tcgctgcccc aggcctcaag 1081 ccgggcaccc aaccctggat gccacccccc agcgggtacc agaggaaagc tggcagcagg 1141 cgcctcctcc cccaacgcat cccagccagt gccatgtcct ctgcaggtgg agttactggc 1201 ctactccttc cccatgagcc ctccctgtct gcactgccca ggccagaggg tagagcacag 1261 gggtttcccc atactacctc ccctccccag gacactccca ggcttgggtt ttttctatag 1321 gtttggcggg gggccacagg gaggggaccc tgacaataaa gagattggat ccc //