LOCUS AK291052 4738 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77111 partial cds, highly similar to Homo
sapiens microtubule-associated protein 1A (MAP1A), mRNA.
ACCESSION AK291052
VERSION AK291052.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4738)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4738
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI3007751"
/clone_lib="NT2RI3"
/db_xref="H-InvDB:HIT000423849"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 440..>4738
/codon_start=1
/note="ighly similar to Homo sapiens
microtubule-associated protein 1A (MAP1A), mRNA"
/protein_id="BAF83741.1"
/transl_table=1
/translation="MDGVAEFSEYVSETVDVPSPFDLLEPPTSGGFLKLSKPCCYIFP
GGRGDSALFAVNGFNILVDGGSDRKSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLL
QRKVAELEEEQSQGSSSYSDWVKNLISPELGVVFFNVPEKLRLPDASRKAKRSIEEAC
LTLQHLNRLGIQAEPLYRVVSNTIEPLTLFHKMGVGRLDMYVLNPVKDSKEMQFLMQK
WAGNSKAKTGIVLPNGKEAEISVPYLTSITALVVWLPANPTEKIVRVLFPGNAPQNKI
LEGLEKLRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRADSKESLKATTKTAVSKL
AKREEVVEEGAKEARSELAKELAKTEKRAKESSEKPPEKPAKPERVKTESSEALKAEK
RKLIKDKVGKKHLKEKISKLEEKKDKEEKEIKKERKELKKDEGRKEEKKDAKKGEKRK
DTKPELKKISKPDLKPFTPEVRKTLYKAKVPGRVKIDRSRAIRGEKELSSEPQTPPAQ
KGTVPLPTISGHRELVLSSPEDLTQDFEEMKREERALLAEQRDTGLGDKPFPLDTAEE
GPPSTAIQGTPPSVPGLGQEEHVMKEKELVPEVPEEQGSKDRGLDSGAETEEEKDTWE
EKKQREAERLPDRTEAREESEPEVKEDVIEKAELEEMEEVHPSDEEEEDATKAEGFYQ
KHMQEPLKVTPRSREAFGGRELGLQGKAPEKETSLFLSSLTTPAGATEHVSYIQDETI
PGYSETEQTISDEEIHDEPEERPAPPRFHTSTYDLPGPEGAGPFEASQPADSAVPATS
GKVYGTPETELTYPTNIVAAPLAEEEHVSSATSITECDKLSSFATSVAEDQSVASLTA
PQTEETGKSSLLLDTVTSIPSSRTEATQGLDYVPSAGTISPTSSLEEDKGFKSPPCED
FSVTGESEKRGEIIGKGLSGERAVEEEEEETANVEMSEKLCSQYGTPVFSAPGHALHP
GEPALGEAEERCLSPDDSTVKMASPPPSGPPSATHTPFHQSPVEEKSEPQDFQEADSW
GDTKRTPGVGKEDAAEETVKPGPEEGTLEKEEKVPPPRSPQAQEAPVNIDEGLTGCTI
QLLPAQDKAIVFEIMEAGEPTGPILGAEALPGGLRTLPQEPGKPQKDEVLRYPDRSLS
PEDAESLSVLSVPSPDTANQEPTPKSPCGLTEQYLHKDRWPEVSPEDTQSLSLSEESP
SKETSLDVSSKQLSPESLGTLQFGELNLGKEEMGHLMQAEDTSHHTAPMSVPEPHAAT
ASPPTDGTTRYSAQTDITDDSLDRKSPASSFSHSTPSGNGKYLPGAITSPDEHILTPD
SSFSKSPESLPGPALEDIAIKWEDKVPGLKDRTSEQKKEPEPKDEVLQQKDKTLEHKE
VVEPKDTAIYQKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKD"
BASE COUNT 1349 a 1249 c 1276 g 864 t
ORIGIN
1 ccctgaagct gccggctgag gccggagctg ccgcctccat gagaggcttc ctcctacacc
61 ccagggccag aggacccttt gccaccagag tgagatccta gagaccatca tcctggtaaa
121 tcccagtgca gacagcatca gctctgaggt tcatcatctt cttagcagct catcagctta
181 taaactacta atcttgagtg ggcaaagttt agagcctggg ggagacctca tcctacagag
241 tggcacctac tcatatgaaa actttgccca ggtccttcac aaccccgaga tttcccaatt
301 gctcagcaat agagaccctg ggatacaggc cttccttacc gtgtcctgct taggggaagg
361 tgattggagc cacctgggat tatccagttc ccaagagacc ctgcacctcc ggctaaaccc
421 tgagcccact ctgcccacca tggacggcgt ggctgagttc tccgagtatg tctctgagac
481 tgtggacgtg ccatccccat ttgacctact agagcccccc acctcagggg gcttcctcaa
541 gctctccaag ccttgttgct acatcttccc aggtggtcgt ggggactctg ccctctttgc
601 tgtcaatggt ttcaacatcc tggtggatgg tggctctgat cgcaagtcct gtttttggaa
661 gctggtacgg cacttggacc gcattgactc ggtgctactc acacacattg gggcagacaa
721 cctgccaggc atcaatggac tactgcagcg caaagtggca gagctagagg aggagcagtc
781 ccagggctct agcagttaca gcgactgggt gaagaacctt atctctcctg agcttggagt
841 tgtctttttc aacgtgcctg agaagctgcg gcttcctgat gcctcccgga aagccaagcg
901 tagcattgag gaggcctgcc tcactctgca gcacttaaac cgcctgggca tccaggctga
961 gcctctatat cgtgtggtca gcaataccat tgagccactg accctcttcc acaaaatggg
1021 tgtgggccgg ctggacatgt atgtcctcaa ccctgtcaag gacagcaagg agatgcagtt
1081 cctcatgcaa aagtgggcag gcaatagtaa agccaagaca ggcatcgtgc tgcccaatgg
1141 gaaggaggct gagatctccg tgccctacct tacctctatc actgctctgg tggtctggct
1201 accagccaat cccactgaga agattgtgcg tgtgcttttt ccaggaaatg ctccccaaaa
1261 caagatcttg gagggcctag aaaagcttcg gcatctggac ttcctgcgtt accctgtggc
1321 cacgcagaag gacctggctt ctggggctgt gcctaccaac ctcaagccca gcaaaatcaa
1381 acagcgggct gatagcaagg agagcctcaa agccactacc aagacggccg tgagcaagtt
1441 ggccaaacgg gaggaggtgg tagaagaggg agccaaggag gcacgttcag agctggccaa
1501 ggagttagcc aagacagaga agagggcaaa agagtcatct gagaagcccc cagagaagcc
1561 tgccaagcct gagagggtga agacagagtc aagtgaggca ctgaaggcag agaagcgaaa
1621 gctgatcaaa gacaaggtag ggaaaaagca ccttaaagaa aagatatcaa agctggaaga
1681 aaaaaaagac aaggaggaaa aagagatcaa aaaggagagg aaagagctca agaaggatga
1741 aggaaggaag gaggagaaga aggatgccaa gaagggggag aagaggaaag ataccaaacc
1801 tgagctcaag aagatttcca agccagacct aaagcccttt actcctgagg tacgtaagac
1861 cctctataaa gccaaggtcc ctggaagagt caaaatagac aggagccgtg ctatccgtgg
1921 ggagaaggag ctgtcttctg agccccagac acccccagcc cagaagggaa ctgtaccact
1981 cccaaccatc agtgggcaca gggagctggt cctatcctca ccagaggacc tcacacagga
2041 ctttgaggag atgaagcgtg aggagagggc tttgctggct gaacaaaggg acacaggact
2101 aggagataag ccattccctc tagacactgc agaggaggga cccccaagta cagctatcca
2161 gggaacacca ccctctgttc cagggctggg acaagaagaa catgtgatga aggagaaaga
2221 gcttgtccca gaggtccctg aggaacaagg cagcaaggac agaggcctag actctggggc
2281 tgaaacagag gaagagaaag atacctggga ggaaaagaag cagagggaag cagagaggct
2341 cccagacaga acagaagcca gagaggaaag tgaacctgaa gtaaaggagg atgtgataga
2401 aaaggctgag ttagaagaaa tggaggaggt acacccttca gatgaggagg aagaggacgc
2461 gacaaaagct gagggttttt accaaaaaca tatgcaggaa cccttgaagg taactccaag
2521 gagccgggag gcttttgggg gtcgggaatt gggactccag ggcaaggccc ctgagaagga
2581 gacctcgtta ttcctaagca gcctgaccac acctgcagga gccactgagc atgtctctta
2641 catccaggat gagacaatcc ctggctactc agagactgag cagaccatct cagatgagga
2701 gatccatgat gagccggagg agcgcccagc tccacccaga tttcatacaa gtacatatga
2761 cctgcccggg cctgaaggtg ctggcccatt cgaagccagc caacctgccg atagtgctgt
2821 tcctgctacc tctggcaaag tctatggaac gccagagact gaactcacct accccactaa
2881 catagtggct gcccctttgg ctgaagagga acatgtgtcc tcggccactt caatcactga
2941 gtgtgacaaa ctttcttcct ttgccacatc agtggctgag gaccaatctg tggcctcact
3001 tacagctccc cagacagagg agacaggcaa gagctccctg ctgcttgaca cagtcacaag
3061 catcccttcc tcccgtactg aagctacgca gggcttggac tatgtgccat cagctggtac
3121 catctcaccc acctcctcac tggaagaaga caagggcttc aaatcaccac cctgtgagga
3181 cttctctgtg actggggagt cagagaagag aggagagatc atagggaaag gcttgtctgg
3241 agagagagct gtggaagagg aagaggagga gacagcaaac gtagagatgt ctgagaaact
3301 ttgcagtcaa tatggaactc cagtgtttag tgcccctggg catgccctac atccaggaga
3361 accagccctt ggagaagcag aggagcggtg ccttagccca gatgacagca cagtgaagat
3421 ggcttctcct ccaccatctg gcccacccag tgccacccac acaccctttc atcagtcccc
3481 agtggaagaa aagtctgagc cccaagactt tcaggaggca gactcctggg gagacactaa
3541 gcgcacacca ggtgtgggca aagaagatgc tgctgaggag acagtcaagc cagggcctga
3601 agagggcaca ctagagaagg aagagaaagt tcctcctccc aggagccccc aggcccagga
3661 agcacctgtc aacattgatg aggggcttac aggctgtacc attcaactgt tgccagcaca
3721 ggataaagca atagtctttg agattatgga ggcaggagag cccacaggcc caattctggg
3781 agcagaagcc cttcccggag gtttgaggac tttaccccaa gaacctggca aacctcagaa
3841 agatgaggtg ctcagatatc ctgaccgaag cctctctcct gaagatgcag aatccctctc
3901 tgtcctcagc gtgccctccc cagacactgc caaccaagag cctaccccca agtctccctg
3961 tggcctgaca gaacagtacc tacacaaaga ccgttggcca gaggtatctc cagaagacac
4021 ccagtcactt tctctgtcag aagagagtcc cagcaaggag acctccctgg atgtctcttc
4081 taagcagctc tctccagaaa gccttggcac cctccagttt ggggaactaa accttgggaa
4141 ggaagaaatg gggcatctga tgcaggccga ggatacttct caccacacag ctcccatgtc
4201 tgttccagag ccccatgcag ccacagcgtc acctcccaca gatgggacaa ctcgatactc
4261 tgcacagaca gacatcacag atgacagcct tgacaggaag tcacctgcca gctcattctc
4321 tcactctaca ccttcaggaa atgggaagta cttacctggg gcgatcacaa gccctgatga
4381 acacattctg acacctgata gctccttctc caagagtcct gagtctttgc caggccctgc
4441 cttggaggac attgccataa agtgggaaga taaagttcca gggttgaaag acagaacctc
4501 agaacagaag aaggaacctg agccaaagga tgaagtttta cagcagaaag acaaaactct
4561 ggagcacaag gaggtggtag agccgaagga tacagccatc tatcagaaag atgaggctct
4621 gcatgtaaag aatgaggctg tgaaacagca ggataaggct ttagaacaaa agggcagaga
4681 cttagagcaa aaagacacag ccctagaaca gaaggacaag gccctggaac caaaagac
//