LOCUS AK291049 4338 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76807 complete cds, highly similar to Homo
sapiens autoantigen (RCD-8), mRNA.
ACCESSION AK291049
VERSION AK291049.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4338)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4338
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI3007523"
/clone_lib="NT2RI3"
/db_xref="H-InvDB:HIT000423846"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 8..4213
/codon_start=1
/note="highly similar to Homo sapiens autoantigen
(RCD-8), mRNA"
/protein_id="BAF83738.1"
/transl_table=1
/translation="MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDL
NGLLVPDPLCSGDSTSANKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVA
SSDSSISSKARGSNKVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVR
VISVSTSERTLLKGFTGSVADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEIL
VHIRQPEGTPLNHFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSH
STWPVDVSQIKQGFIVVKGHSTCLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDEP
RCLHEWKPHDGRPLSCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTVSWTCLQ
TIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSI
SEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKL
FCVHTKALQDVQIRFQPQLNPDVVAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQ
PDLRRIVELPAPADFLSLSSETKPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSS
SSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQLDGSLTMSSSGSLQASPRGLLP
GLLPAPADKLTPKGPGQVPTATSALSLELQEVEPLGLPQASPSRTRSPDVISSASTAL
SQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRPGPELGPQLGLDGG
PGDGDRHNTPSLLEAALTQEASTPDSQVWPTAPDITRETCSTLAESPRNGLQEKHKSL
AFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVPAPRLPAKDWKTKGS
PRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRELAELRHSQEELL
QRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQA
LSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKL
LKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQ
EYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVAGSVRAEVQHQL
HVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQ
AQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPH
NSLGKAARRLSLMLHGLVTPSLP"
BASE COUNT 920 a 1341 c 1252 g 825 t
ORIGIN
1 agggcccatg gcctcctgcg cgagcatcga catcgaggac gccacgcagc acctgcggga
61 catcctcaag ctggaccggc ccgcgggcgg ccccagtgca gagagcccac ggccatccag
121 tgcctacaat ggggacctca atggacttct ggtcccagac ccgctctgct caggtgatag
181 tacctcagca aacaagactg gtcttcggac catgccaccc attaacctgc aagagaagca
241 ggtcatctgt ctctcaggag atgatagctc cacctgcatt gggattttgg ccaaggaggt
301 ggagattgtg gctagcagtg actctagcat ttcaagcaag gcccggggaa gcaacaaggt
361 gaaaattcag cctgtcgcca agtatgactg ggaacagaag tactactatg gcaacctgat
421 tgctgtgtct aactccttct tggcctatgc cattcgggct gccaacaatg gctctgccat
481 ggtgcgggtg atcagcgtca gcacttcgga gcggaccttg ctcaagggct tcacaggcag
541 tgtggctgat ctggctttcg cgcacctcaa ctctccacag ctggcctgcc tggatgaggc
601 aggcaacctg ttcgtgtggc gcttggctct ggttaatggc aaaattcaag aagagatctt
661 ggtccatatt cggcagccag agggcacgcc actgaaccac tttcgcagga tcatctggtg
721 ccccttcatc cctgaggaga gcgaagactg ctgcgaggag agcagcccaa cagtggccct
781 gctgcatgaa gaccgggctg aggtgtggga cctggacatg ctccgctcca gccacagtac
841 ctggcctgtg gatgttagcc agatcaagca gggcttcatt gtggtaaaag gtcatagcac
901 gtgcctcagt gaaggagccc tctctcctga tgggactgtg ctggctactg cgagccacga
961 tggctatgtc aagttctggc agatctacat tgaggggcaa gatgagccaa ggtgtctgca
1021 cgagtggaaa cctcatgatg ggcggcccct ctcctgcctc ctgttctgtg acaaccataa
1081 gaaacaagac cctgatgtcc ctttctggag gttccttatt actggtgctg accagaaccg
1141 agagttaaag atgtggtgta cagtatcctg gacctgcctg cagactattc gcttctcccc
1201 agatatcttc agctcagtga gtgtgccccc tagcctcaag gtttgcttgg acctctcagc
1261 agaatacctg attctcagcg atgtgcaacg gaaggtcctc tatgtgatgg agctgctgca
1321 aaaccaggag gagggccacg cctgcttcag ctccatctcg gagttcctgc tcacccaccc
1381 tgtgctgagc tttggtatcc aggttgtgag tcgctgccgg ctacggcaca ctgaggtgct
1441 gcctgccgaa gaggaaaatg acagcctggg tgctgatggt acccatggag ccggtgccat
1501 ggagtctgcg gccggtgtgc tcatcaagct cttttgtgtg catactaagg cactgcaaga
1561 tgtgcagatc cgcttccagc cacagctgaa ccctgatgtg gtggccccac tgcccaccca
1621 cactgcccac gaggacttca catttggaga gtctcggccc gaactgggct ctgagggcct
1681 ggggtcagcc gctcacggct cccagcctga cctccgacga atcgtggagc tgcctgcacc
1741 tgccgacttc ctcagtctga gcagtgagac caagcccaag ttgatgacac ctgacgcctt
1801 catgacacct agcgcctcct tgcagcagat cactgcctct cccagcagca gcagcagcgg
1861 tagcagcagc agcagcagca gtagcagcag ctcccttaca gctgtgtctg ccatgagcag
1921 cacctcagct gtggacccct ccttgaccag gccacctgag gagctgacct tgagccccaa
1981 gctgcagctg gatggcagcc tgacaatgag cagcagtggc agccttcagg caagcccgcg
2041 tggcctcctg cctggcctgc tcccagcccc agctgacaaa ctgactccca aggggccggg
2101 ccaggtgcct actgccacct ctgcactgtc cctggagctg caggaagtgg agcccctggg
2161 gctaccccaa gcctccccta gccgcactcg ttcccctgat gtcatctcct cagcttccac
2221 tgccctgtcc caggacatcc ctgagattgc atctgaggcc ctgtcccgtg gttttggctc
2281 ctctgcacca gagggccttg agccagacag tatggcttca gccgcctcgg cactgcacct
2341 gctgtcccca cggccccggc cagggcccga gctcggcccc cagctcgggc ttgatggagg
2401 ccctggggat ggagatcggc ataatacccc ctccctcctg gaggcagcct tgacccagga
2461 ggcctcgact cctgacagtc aggtttggcc cacagcacct gacattactc gtgagacctg
2521 cagcaccctg gcagaaagcc ccaggaatgg ccttcaggaa aagcacaaga gcctggcctt
2581 ccaccgacca ccatatcacc tgctgcagca acgtgacagc caggatgcca gtgctgagca
2641 aagtgaccat gatgatgagg tggccagcct tgcctctgct tcaggaggct ttggcaccaa
2701 agttcctgct ccacggctgc ctgccaagga ctggaagacc aagggatccc ctcgaacctc
2761 acccaagctc aagaggaaaa gcaagaagga tgatggggat gcagccatgg gatcccggct
2821 cacagagcac caggtggcag agccccctga ggactggcca gcactaattt ggcaacagca
2881 gagagagctg gcagagctgc ggcacagcca ggaagagctg ctgcagcgtc tgtgtaccca
2941 actcgaaggc ctgcagagca cagtcacagg ccacgtagaa cgtgcccttg agactcggca
3001 cgagcaggaa cagcggcggc tggagcgagc actggctgag gggcagcagc ggggagggca
3061 gctgcaggag cagctgacac aacagttgtc ccaagcactg tcgtcagctg tagctgggcg
3121 gctagagcgc agcatacggg atgagatcaa gaagacagtc cctccatgtg tctcaaggag
3181 tctggagcct atggcaggcc aactgagcaa ctcagtggct accaagctca cagctgtgga
3241 gggcagcatg aaagagaaca tctccaagct gctcaagtcc aagaacttga ctgatgccat
3301 cgcccgagca gctgcagaca cattacaagg gccgatgcag gctgcctacc gggaagcctt
3361 ccagagtgtg gtgctgccgg cctttgagaa gagctgccag gccatgttcc agcaaatcaa
3421 tgatagcttc cggctgggga cacaggaata cttgcagcag ctagaaagcc acatgaagag
3481 ccggaaggca cgggaacagg aggccaggga gcctgtgcta gcccagctgc ggggcctggt
3541 cagcacactg cagagtgcca ctgagcagat ggcagccacc gtggccggca gtgttcgtgc
3601 tgaggtgcag caccagctgc atgtggctgt gggcagcctg caggagtcca ttttagcaca
3661 ggtacagcgc atcgttaagg gtgaggtgag tgtggcgctc aaggagcagc aggccgccgt
3721 cacctccagc atcatgcagg ccatgcgctc agctgctggc acacctgtcc cctctgccca
3781 ccttgactgc caggcccagc aagcccatat cctgcagctg ctgcagcagg gccacctcaa
3841 tcaggccttc cagcaggcgc tgacagctgc tgacctgaac ctggtgctgt atgtgtgtga
3901 aactgtggac ccagcccagg tttttgggca gccaccctgc ccgctctccc agcctgtgct
3961 cctttccctc atccagcagc tggcatctga ccttggcact cgaactgacc tcaagctcag
4021 ctacctggaa gaggccgtga tgcacctgga ccacagtgac cccatcactc gggaccacat
4081 gggctccgtt atggcccagg tgcgccaaaa gctttttcag ttcctgcagg ctgagccaca
4141 caactcactt ggcaaagcag ctcggcgtct cagcctcatg ctgcatggcc tcgtgacccc
4201 cagcctccct tagctgctaa gcctgccttg cccaggggtg ggatggcact gaaggccagc
4261 agacaggcct aggctggggc agggtcacgg ctggccttta cctgctcagg cccccatctc
4321 tggggtgttt gggggtca
//