LOCUS AK291039 2509 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75314 complete cds, highly similar to Homo
sapiens TANK binding kinase TBK1 (TBK1) mRNA.
ACCESSION AK291039
VERSION AK291039.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2509)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2509
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI3006159"
/clone_lib="NT2RI3"
/db_xref="H-InvDB:HIT000423836"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 105..2294
/codon_start=1
/note="highly similar to Homo sapiens TANK binding kinase
TBK1 (TBK1) mRNA"
/protein_id="BAF83728.1"
/transl_table=1
/translation="MQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS
FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS
NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRDIKPGNIMRVIGEDGQSVYKLTDFGA
ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS
LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL
LTPVLANILEADQEKCWGFDQFFAETSDILHRMVIHVFSLQQMTAHKIYIHSYNTATI
FHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEENPIFVVSREPLNTIGL
IYEKISLPKVHPRYDLDGDASMAKAITGVVCYACRIASTLLLYQELMRKGIRWLIELI
KDDYNETVHKKTEVVITLDFCIRNIEKTVKVYEKLMKINLEAAELGEISDIHTKLLRL
SSSQGTIETSLQDIDSRLSPGGSLADAWAHQEGTHPKDRNVEKLQVLLNCMTEIYYQF
KKDKAERRLAYNEEQIHKFDKQKLYYHATKAMTHFTDECVKKYEAFLNKSEEWIRKML
HLRKQLLSLTNQCFDIEEEVSKYQEYTNELQETLPQKMFTASSGIKHTMTPIYPSSNT
LVEMTLGMKKLKEEMEGVVKELAENNHILERFGSLTMDGGLRNVDCL"
BASE COUNT 853 a 413 c 534 g 709 t
ORIGIN
1 aagccggaag tgtcctgagt ctcgaggagg ccgcgggagc ccgccggcgg tggcgcggcg
61 gagacccggc tggtataaca agaggattgc ctgatccagc caagatgcag agcacttcta
121 atcatctgtg gcttttatct gatattttag gccaaggagc tactgcaaat gtctttcgtg
181 gaagacataa gaaaactggt gatttatttg ctatcaaagt atttaataac ataagcttcc
241 ttcgtccagt ggatgttcaa atgagagaat ttgaagtgtt gaaaaaactc aatcacaaaa
301 atattgtcaa attatttgct attgaagagg agacaacaac aagacataaa gtacttatta
361 tggaattttg tccatgtggg agtttataca ctgttttaga agaaccttct aatgcctatg
421 gactaccaga atctgaattc ttaattgttt tgcgagatgt ggtgggtgga atgaatcatc
481 tacgagagaa tggtatagtg caccgtgata tcaagccagg aaatatcatg cgtgttatag
541 gggaagatgg acagtctgtg tacaaactca cagattttgg tgcagctaga gaattagaag
601 atgatgagca gtttgtttct ctgtatggca cagaagaata tttgcaccct gatatgtatg
661 agagagcagt gctaagaaaa gatcatcaga agaaatatgg agcaacagtt gatctttgga
721 gcattggggt aacattttac catgcagcta ctggatcact gccatttaga ccctttgaag
781 ggcctcgtag gaataaagaa gtgatgtata aaataattac aggaaagcct tctggtgcaa
841 tatctggagt acagaaagca gaaaatggac caattgactg gagtggagac atgcctgttt
901 cttgcagtct ttctcggggt cttcaggttc tacttacccc tgttcttgca aacatccttg
961 aagcagatca ggaaaagtgt tggggttttg accagttttt tgcagaaact agtgatatac
1021 ttcaccgaat ggtaattcat gttttttcgc tacaacaaat gacagctcat aagatttata
1081 ttcatagcta taatactgct actatatttc atgaactggt atataaacaa accaaaatta
1141 tttcttcaaa tcaagaactt atctacgaag ggcgacgctt agtcttagaa cctggaaggc
1201 tggcacaaca tttccctaaa actactgagg aaaaccctat atttgtagta agccgggaac
1261 ctctgaatac cataggatta atatatgaaa aaatttccct ccctaaagta catccacgtt
1321 atgatttaga cggggatgct agcatggcta aggcaataac aggggttgtg tgttatgcct
1381 gcagaattgc cagtacctta ctgctttatc aggaattaat gcgaaagggg atacgatggc
1441 tgattgaatt aattaaagat gattacaatg aaactgttca caaaaagaca gaagttgtga
1501 tcacattgga tttctgtatc agaaacattg aaaaaactgt gaaagtatat gaaaagttga
1561 tgaagatcaa cctggaagcg gcagagttag gtgaaatttc agacatacac accaaattgt
1621 tgagactttc cagttctcag ggaacaatag aaaccagtct tcaggatatc gacagcagat
1681 tatctccagg tggatcactg gcagacgcat gggcacatca agaaggcact catccgaaag
1741 acagaaatgt agaaaaacta caagtcctgt taaattgcat gacagagatt tactatcagt
1801 tcaaaaaaga caaagcagaa cgtagattag cttataatga agaacaaatc cacaaatttg
1861 ataagcaaaa actgtattac catgccacaa aagctatgac gcactttaca gatgaatgtg
1921 ttaaaaagta tgaggcattt ttgaataagt cagaagaatg gataagaaag atgcttcatc
1981 ttaggaaaca gttattatcg ctgactaatc agtgttttga tattgaagaa gaagtatcaa
2041 aatatcaaga atatactaat gagttacaag aaactctgcc tcagaaaatg tttacagctt
2101 ccagtggaat caaacatacc atgaccccaa tttatccaag ttctaacaca ttagtagaaa
2161 tgactcttgg tatgaagaaa ttaaaggaag agatggaagg ggtggttaaa gaacttgctg
2221 aaaataacca cattttagaa aggtttggct ctttaaccat ggatggtggc cttcgcaacg
2281 ttgactgtct ttagctttct aatagaagtt taagaaaagt ttccgtttgc acaagaaaat
2341 aacgcttggg cattaaatga atgcctttat agatagtcac ttgtttctac aattcagtat
2401 ttgatgtggt cgtgtaaata tgtacaatat tgtaaataca taaaaaatat acaaattttt
2461 ggctgctgtg aagatgtaat tttatctttt aacatttata attatatga
//