LOCUS AK291037 1748 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76279 complete cds, highly similar to Homo
sapiens limb region 1 homolog (mouse) (LMBR1), mRNA.
ACCESSION AK291037
VERSION AK291037.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1748
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI3006121"
/clone_lib="NT2RI3"
/db_xref="H-InvDB:HIT000423834"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 187..1659
/codon_start=1
/note="highly similar to Homo sapiens limb region 1
homolog (mouse) (LMBR1), mRNA"
/protein_id="BAF83726.1"
/transl_table=1
/translation="MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKR
KSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNG
SLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALL
ILGIVWVASALIDNDAASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFT
VMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLK
TKLERRKKASAWERNLVYPAVTVLLLIETSISVLLVACNILCLLVDETAMPKGTRGPG
IGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCV
SILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLFAIVTTLCLVRKF
TSAVREELFKALGLHKLHLPNTSRDSETAKPSVNGHQKAL"
BASE COUNT 416 a 389 c 420 g 523 t
ORIGIN
1 agagctgctc atctgaggct gctgaggcga cggccggtgt cgtggtcgcg gtacctgtcc
61 caacacggct cgcgggcccg tgccggctcc ggtccccggc gcggctgtcc gagcccctgc
121 ggcgggcgga cgatggtgtg gcggagcacg cggacgcggg cggcgcggcg gcgggcatga
181 aggaggatgg aagggcagga cgaggtgtcg gcgcgggagc agcacttcca cagccaagtg
241 cgggagtcca cgatatgttt ccttcttttt gccattctct acgttgtttc ctacttcatc
301 atcacaagat acaagagaaa atcagatgaa caagaagatg aagatgccat cgtcaacagg
361 atttcgttgt ttttgagcac gttcactctc gcagtgtcag ctggggctgt tttgctttta
421 cccttctcaa tcatcagcaa tgaaatcctg ctttcttttc ctcagaacta ctatattcag
481 tggctaaatg gctccctgat tcatggtttg tggaatcttg cttccctttt ttccaacctt
541 tgtttatttg tattgatgcc ctttgccttt ttctttctgg aatcagaagg ctttgctggc
601 ctgaaaaagg gaatccgagc ccgcatttta gagactttgg tcatgcttct tcttcttgcg
661 ttactcattc ttgggatagt gtgggtagct tcagcactca ttgacaacga tgccgcaagc
721 atggaatctt tatatgatct ctgggagttc tatctaccct atttatattc ctgtatatca
781 ttgatgggat gtttgttact tctcttgtgt acaccagttg gcctttctcg tatgttcaca
841 gtgatgggtc agttgctagt gaagccaaca attcttgaag acctggatga acaaatttat
901 atcattacct tagaggaaga agcactccag agacgactaa atgggctgtc ttcatcggtg
961 gaatacaaca taatggagtt ggaacaagaa cttgaaaatg taaagactct taagacaaaa
1021 ttagagaggc gaaaaaaggc ttcagcatgg gaaagaaatt tggtgtatcc cgctgttacg
1081 gttctccttc ttattgagac atccatctcg gtcctcttgg tggcttgtaa tattctttgc
1141 ctattggttg atgaaacagc aatgccaaaa ggaacaaggg ggcctggaat aggaaatgcc
1201 tctctttcta cgtttggttt tgtgggagct gcgcttgaaa tcattttgat tttctatctt
1261 atggtgtcct ctgttgtcgg cttctatagc cttcgatttt ttggaaactt tactcccaag
1321 aaagatgaca caactatgac aaagatcatt ggaaattgtg tgtccatctt ggttttgagc
1381 tctgctctgc ctgtgatgtc gagaacactg ggaatcacta gatttgatct acttggcgac
1441 tttggaaggt ttaattggct gggaaatttc tatattgtat tatcctacaa tttgcttttt
1501 gctattgtga caacattgtg tctggtccga aaattcacct ctgcagttcg agaagaactt
1561 ttcaaggccc tagggcttca taaacttcac ttaccaaata cttcaaggga ttcagaaaca
1621 gccaagcctt ctgtaaatgg gcatcagaaa gcactgtgag acgcacagac ggcgtcttct
1681 gccaccaaga gacccgagaa ctccagattc acgacattcc tgtcccatgt agaagcattt
1741 ccattcaa
//