LOCUS AK291026 1530 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ77420 complete cds, highly similar to Homo sapiens cancer susceptibility candidate 4 (CASC4), transcript variant 2, mRNA. ACCESSION AK291026 VERSION AK291026.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1530) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1530 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3004212" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000423823" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 77..1219 /codon_start=1 /note="highly similar to Homo sapiens cancer susceptibility candidate 4 (CASC4), transcript variant 2, mRNA" /protein_id="BAF83715.1" /transl_table=1 /translation="MVGFGANRRAGRLPSLVLVVLLVVIVVLAFNYWSISSRHVLLQE EVAELQGQVQRTEVARGRLEKRNSDLLLLVDTHKKQIDQKEADYGRLSSRLQAREGLG KRCEDDKVKLQNNISYQMADIHHLKEQLAELRQEFLRQEDQLQDYRKNNTYLVKRLEY ESFQCGQQMKELRAQHEENIKKLADQFLEEQKQKTQKIQSNDGKELDINNQVVPKNIP KVAENVADKNEEPSSNHIPHGKEQIKRGGDAGMPGIEENDLAKVDDLPPALRKPPISV SQHESHQAISHLPTGQPLSPNMPPDSHINHNGNPGTSKQNPSSPLQRLIPGSNLDSEP RIQTDILKQATKDRVSDFHKLKQNDEERELQMDPADYGKQHFNDVL" BASE COUNT 491 a 333 c 347 g 359 t ORIGIN 1 aactccagcc gaggcctggg cttctgcctg caggtgtctg cggcgaggcc cctagggtac 61 agcccgattt ggccccatgg tgggtttcgg ggccaaccgg cgggctggcc gcctgccctc 121 tctcgtgctg gtggtgctgc tggtggtgat cgtcgtcctc gccttcaact actggagcat 181 ctcctcccgc cacgtcctgc ttcaggagga ggtggccgag ctgcagggcc aggtccagcg 241 caccgaagtg gcccgcgggc ggctggaaaa gcgcaattcg gacctcttgc tgttggtgga 301 cacgcacaag aaacagatcg accagaagga ggccgactac ggccgcctca gcagccggct 361 gcaggccaga gagggcctcg ggaagagatg cgaggatgac aaggttaaac tacagaacaa 421 catatcgtat cagatggcag acatacatca tttaaaggag caacttgctg agcttcgtca 481 ggaatttctt cgacaagaag accagcttca ggactatagg aagaacaata cttaccttgt 541 gaagaggtta gaatatgaaa gttttcagtg tggacagcag atgaaggaat tgagagcaca 601 gcatgaagaa aatattaaaa agttagcaga ccagttttta gaggaacaaa agcaaaagac 661 ccaaaagatt caatcaaatg atggaaagga attggatata aacaatcaag tagtacctaa 721 aaatattcca aaagtagctg agaatgttgc agataagaat gaagaaccct caagcaatca 781 tattccacat gggaaagaac aaatcaaaag aggtggtgat gcagggatgc ctggaataga 841 agagaatgac ctagcaaaag ttgatgatct tccccctgct ttaaggaagc ctcctatttc 901 agtttctcaa catgaaagtc atcaagcaat ctcccatctt ccaactggac aacctctctc 961 cccaaatatg cctccagatt cacacataaa ccacaatgga aaccccggta cttcaaaaca 1021 gaatccttcc agtcctcttc agcgtttaat tccaggctca aacttggaca gtgaacccag 1081 aattcaaaca gatatactaa agcaggctac caaggacaga gtcagtgatt tccataaatt 1141 gaagcaaaat gatgaagaac gagagcttca aatggatcct gcagactatg gaaagcaaca 1201 tttcaatgat gtcctttaag tcctaaagga atgcttcaga aaacctaaag tgctgtaaaa 1261 tgaaatcatt ctactttgtc ctttctgact tttgttgtaa agacgaattg tatcagttgt 1321 aaagatacat tgagatagaa ttaaggaaaa actttaatgg aggaatgtac ccatgtacat 1381 atgtgaactt tttcatattg tattatcaag gtatagactt ttttggttat gatacagtta 1441 agccaaaaac agctaatctt tgcatctaaa gcaaactaat gtatatttca cattttattg 1501 agccgactta tttccacaaa tagataaaca //