LOCUS AK291010 3265 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ77109 complete cds, highly similar to Homo sapiens MDC2 mRNA. ACCESSION AK291010 VERSION AK291010.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3265) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3265 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI3001370" /clone_lib="NT2RI3" /db_xref="H-InvDB:HIT000423807" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 171..2783 /codon_start=1 /note="highly similar to Homo sapiens MDC2 mRNA" /protein_id="BAF83699.1" /transl_table=1 /translation="MQAAVAVSVPFLLLCVLGTCPPARCGQAGDASLMELEKRKENRF VERQSIVPLRLIYRSGGEDESRHDALDTRVRGDLGGRQLTHVDQASFQVDAFGTSFIL DVVLNHDLLSSEYIERHIEHGGKTVEVKGGEHCYYQGHIRGNPDSFVALSTCHGLHGM FYDGNHTYLIEPEENDTTQEDFHFHSVYKSRLFEFSLDDLPSEFQQVNITPSKFILKP RPKRSKRQLRRYPRNVEEETKYIELMIVNDHLMFKKHRLSVVHTNTYAKSVVNMADLI YKDQLKTRIVLVAMETWATDNKFAISENPLITLREFMKYRRDFIKEKSDAVHLFSGSQ FESSRSGAAYIGGICSLLKGGGVNEFGKTDLMAVTLAQSLAHNIGIISDKRKLASGEC KCEDTWSGCIMGDTGYYLPKKFTQCNIEEYHDFLNSGGGACLFNKPSKLLDPPECGNG FIETGEECDCGTPAECVLEGAECCKKCTLTQDSQCSDGLCCKKCKFQPMGTVCREAVN DCDIRETCSGNSSQCAPNIHKMDGYSCDGVQGICFGGRCKTRDRQCKYIWGQKVTASD KYCYEKLNIEGTEKGNCGKDKDTWIQCNKRDVLCGYLLCTNIGNIPRLGELDGEITST LVVQQGRTLNCSGGHVKLEEDVDLGYVEDGTPCGPQMMCLEHRCLPVASFNFSTCLSS KEGTICSGNGVCSNELKCVCNRHWIGSDCNTYFPHNDDAKTGITLSGNGVAGTNIIIG IIAGTILVLALILGITAWGYKNYREQRSNGLSHSWSERIPDTKHISDICENGRPRSNS WQGNLGGNKKKIRGKRFRPRSNSTETLSPAKSPSSSTGSIASSRKYPYPMPPLPDEDK KVNRQSARLWETSI" BASE COUNT 954 a 661 c 819 g 831 t ORIGIN 1 gcagcactga gccgcggtgg aggttgcagc gccacggccg ccgcagcacc ggccggggct 61 gggtggaggt ggccgcgggg accccggggg cgcggagcga gggaaacgga ctcggcggcg 121 ccggcatgag gagctgagcg tctcgggcga ggcgggctga cggcagcacc atgcaggcgg 181 cagtggctgt gtccgtgccc ttcttgctgc tctgtgtcct ggggacctgc cctccggcgc 241 gctgcggcca ggcaggagac gcctcattga tggagctaga gaagaggaag gaaaaccgct 301 tcgtggagcg ccagagcatc gtgccactgc gcctcatcta ccgctcgggc ggcgaagacg 361 aaagtcggca cgacgcgctc gacacgcggg tgcggggcga cctcggtggc cggcagttga 421 ctcatgttga ccaagcaagc ttccaggttg atgcctttgg aacgtcattc attctcgatg 481 tcgtgctaaa tcatgatttg ctgtcctctg aatacataga gagacacatt gaacatggag 541 gcaagactgt ggaagttaaa ggaggagagc actgttacta ccagggccat atccgaggaa 601 accctgactc atttgttgca ttgtcaacat gccacggact tcatgggatg ttctatgacg 661 ggaaccacac atatctcatt gagccagaag aaaatgacac tactcaagag gatttccatt 721 ttcattcagt ttacaaatcc agactgtttg aattttcctt ggatgatctt ccatctgaat 781 ttcagcaagt aaacattact ccatcaaaat ttattttgaa gccaagacca aaaaggagta 841 aacggcagct tcgtcgatat cctcgtaatg tagaagaaga aaccaaatac attgaactga 901 tgattgtgaa tgatcacctt atgtttaaaa aacatcggct ttccgttgta cataccaata 961 cctatgcgaa atctgtggtg aacatggcag atttaatata taaagaccaa cttaagacca 1021 ggatagtatt ggttgctatg gaaacctggg cgactgacaa caagtttgcc atatctgaaa 1081 atccattgat caccctacgt gagtttatga aatacaggag ggattttatc aaagagaaaa 1141 gtgatgcagt tcaccttttt tcgggaagtc aatttgagag tagccggagc ggggcagctt 1201 atattggtgg gatttgctcg ttgctgaaag gaggaggcgt gaatgaattt gggaaaactg 1261 atttaatggc tgttacactt gcccagtcat tagcccataa tattggtatt atctcagaca 1321 aaagaaagtt agcaagtggt gaatgtaaat gcgaggacac gtggtccggg tgcataatgg 1381 gagacactgg ctattatctt cctaaaaagt tcacccagtg taatattgaa gagtatcatg 1441 acttcctgaa tagtggaggt ggtgcctgcc ttttcaacaa accttctaag cttcttgatc 1501 ctcctgagtg tggcaatggc ttcattgaaa ctggagagga gtgtgattgt ggaaccccgg 1561 ccgaatgtgt ccttgaagga gcagagtgtt gtaagaaatg caccttgact caagactctc 1621 aatgcagtga cggtctttgc tgtaaaaagt gcaagtttca gcctatgggc actgtgtgcc 1681 gagaagcagt aaatgattgt gatattcgtg aaacgtgctc aggaaattca agccagtgtg 1741 cccctaatat tcataaaatg gatggatatt catgtgatgg tgttcaggga atttgctttg 1801 gaggaagatg caaaaccaga gatagacaat gcaaatacat ttgggggcaa aaggtgacag 1861 catcagacaa atattgctat gagaaactga atattgaagg gacggagaag ggtaactgtg 1921 ggaaagacaa agacacatgg atacagtgca acaaacggga tgtgctttgt ggttaccttt 1981 tgtgtaccaa tattggcaat atcccaaggc ttggagaact cgatggtgaa atcacatcta 2041 ctttagttgt gcagcaagga agaacattaa actgcagtgg tgggcatgtt aagcttgaag 2101 aagatgtaga tcttggctat gtggaagatg ggacaccttg tggtccccaa atgatgtgct 2161 tagaacacag gtgtcttcct gtggcttctt tcaactttag tacttgcttg agcagtaaag 2221 aaggcactat ttgctcagga aatggagttt gcagtaatga gctgaagtgt gtgtgtaaca 2281 gacactggat aggttctgat tgcaacactt acttccctca caatgatgat gcaaagactg 2341 gtatcactct gtctggcaat ggtgttgctg gcaccaatat cataataggc ataattgctg 2401 gcaccatttt agtgctggcc ctcatattag gaataactgc gtggggttat aaaaactatc 2461 gagaacagag gtcaaatggg ctctctcatt cttggagtga aaggattcca gacacaaaac 2521 atatttcaga catctgtgaa aatgggcgac ctcgaagtaa ctcttggcaa ggtaacctgg 2581 gaggcaacaa aaagaaaatc agaggcaaaa gatttagacc tcggtctaat tcaactgaga 2641 ctttatctcc tgccaagtct ccttcttcat caactgggtc tattgcctcc agcagaaaat 2701 acccttaccc aatgcctcca cttcctgatg aggacaagaa agtgaaccga caaagtgcca 2761 ggctatggga gacatccatt taagatcaac tgtttacatg tgatacatcg aaaactgttt 2821 acttcaactt ttatagaaac ccaggctcat ggaatcactg caaatctatc tgctcttcag 2881 acaatacgaa gaccctctga gatgctacag aggagaggaa gcggagtttc acatctggtt 2941 accattttct ttttgtcatt ggcttaggat ttaactaacc atgaaaagaa ctactgaaat 3001 attacactat aacatggaac aataaaggta ctggtatgtt aatggataat ccgcatgaca 3061 gataatatgt agaaatattc ataaagttaa ctcacatgac ccaaatgtag caagtttcct 3121 aaggtacaat agtggattca gaacttgacg ttctgaggca catcctcact gtaaacagta 3181 atgctatatg catgaagctt ctgtttattg ttttccatat ttaaggaaac aacatcccat 3241 aatagaaatg agcatgcagg gctaa //