LOCUS AK290990 2404 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76043 complete cds, highly similar to Homo
sapiens cyclin T1 (CCNT1), mRNA.
ACCESSION AK290990
VERSION AK290990.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2404)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2404
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2018732"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000423787"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 224..2404
/codon_start=1
/note="highly similar to Homo sapiens cyclin T1 (CCNT1),
mRNA"
/protein_id="BAF83679.1"
/transl_table=1
/translation="MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANL
LQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLE
HVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKC
TQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDG
KHWWEYVDATVTLELLDELTHEFLQILEKTPNGLKRIWNWRACEAAKKTKADDRGTDE
KTSEQTILNMISQSSSDTTIAGLMSMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRW
LSSQPSFKLEPTQGHRTSENLALTGVDHSLPQDGSNAFISQKQNSKSVPSAKVSLKEY
RAKHAEELAAQKRQLENMEANVKSQYAYAAQNLLSHHDSHSSVILKMPIEGSENPERP
FLEKADKTALKMRIPVAGGDKAASSKPEEIKMRIKVHAAADKHNSVEDSVTKSREHKE
KHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNKRPGDPKHSSQTSNLAHKTYSLSSSFS
SSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSLNFSFPSLPTMGQMPGHSSDTSGLS
FSQPSCKTRVPHSKLDKGPTGANGHNTTQTIDYQDTVNMLHSLLSAQGVQPTQPTAFE
FVRPYSDYLNPRSGGISSRSGNTDKPRPPPLPSEPPPPLPPLPK"
BASE COUNT 679 a 619 c 527 g 579 t
ORIGIN
1 gcatattggc tgttaactcg gctacggggt gtagcgaggt gcattccgga agtaggtcct
61 ttgacttttg cttcctctac ggaggcaagt aacaacccgg cggtcgacgc ttagcggaag
121 ttcgtcaagt cgcagttgcc cccgcacagc ggatgtgggt cgcctcttag gtgacgctgg
181 gaagtgcctg cagccttcgc cgctgccttc tggttgaagc actatggagg gagagaggaa
241 gaacaacaac aaacggtggt atttcactcg agaacagctg gaaaatagcc catcccgtcg
301 ttttggcgtg gacccagata aagaactttc ttatcgccag caggcggcca atctgcttca
361 ggacatgggg cagcgtctta acgtctcaca attgactatc aacactgcta tagtatacat
421 gcatcgattc tacatgattc agtccttcac acagttccct ggaaattctg tggctccagc
481 agccttgttt ctagcagcta aagtggagga gcagcccaaa aaattggaac atgtcatcaa
541 ggtagcacat acttgtctcc atcctcagga atcccttcct gatactagaa gtgaggctta
601 tttgcaacaa gttcaagatc tggtcatttt agaaagcata attttgcaga ctttaggctt
661 tgaactaaca attgatcacc cacatactca tgtagtaaag tgcactcaac ttgttcgagc
721 aagcaaggac ttagcacaga cttcttactt catggcaacc aacagcctgc atttgaccac
781 atttagcctg cagtacacac ctcctgtggt ggcctgtgtc tgcattcacc tggcttgcaa
841 gtggtccaat tgggagatcc cagtctcaac tgacgggaag cactggtggg agtatgttga
901 cgccactgtg accttggaac ttttagatga actgacacat gagtttctac agattttgga
961 gaaaactccc aacgggctca aacgcatttg gaattggagg gcatgcgagg ctgccaagaa
1021 aacaaaagca gatgaccgag gaacagatga aaagacttca gagcagacaa tcctcaatat
1081 gatttcccag agctcttcag acacaaccat tgcaggttta atgagcatgt caacttctac
1141 cacaagtgca gtgccttccc tgccagtctc cgaagagtca tccagcaact taaccagtgt
1201 ggagatgttg ccgggcaagc gttggctgtc ctcccaacct tctttcaaac tagaacctac
1261 tcagggtcat cggactagtg agaatttagc acttacagga gttgatcatt ccttaccaca
1321 ggatggttca aatgcattta tttcccagaa gcagaatagt aagagtgtgc catcagctaa
1381 agtgtcactg aaagaatacc gcgcgaagca tgcagaagaa ttggctgccc agaagaggca
1441 actggagaac atggaagcca atgtgaagtc acaatatgca tatgctgccc agaatctcct
1501 ttctcatcat gatagccatt cttcagtcat tctaaaaatg cccatagagg gttcagaaaa
1561 cccggagcgg ccttttctgg aaaaggctga caaaacagct ctcaaaatga gaatcccagt
1621 ggcaggtgga gataaagctg cgtcttcaaa accagaggag ataaaaatgc gcataaaagt
1681 ccatgctgca gctgataagc acaattctgt agaggacagt gttacaaaga gccgagagca
1741 caaagaaaag cacaagactc acccatctaa tcatcatcat catcataatc accactcaca
1801 caagcactct cattcccaac ttccagttgg tactgggaac aaacgtcctg gtgatccaaa
1861 acatagtagc cagacaagca acttagcaca taaaacctat agcttgtcta gttctttttc
1921 ctcttccagt tctactcgta aaaggggacc ctctgaagag actggagggg ctgtgtttga
1981 tcatccagcc aagattgcca agagtactaa atcctcttcc ctaaatttct ccttcccttc
2041 acttcctaca atgggtcaga tgcctgggca tagctcagac acaagtggcc tttccttttc
2101 acagcccagc tgtaaaactc gtgtccctca ttcgaaactg gataaagggc ccactggggc
2161 caatggtcac aacacgaccc agacaataga ctatcaagac actgtgaata tgcttcactc
2221 cctgctcagt gcccagggtg ttcagcccac tcagcctact gcatttgaat ttgttcgtcc
2281 ttatagtgac tatctgaatc ctcggtctgg tggaatctcc tcgagatctg gcaatacaga
2341 caaaccccgg ccaccacctc tgccatcaga acctcctcca ccacttccac cccttcctaa
2401 gtaa
//