LOCUS AK290982 1502 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ75464 complete cds, highly similar to Homo sapiens protein tyrosine phosphatase, receptor type, O (PTPRO), transcript variant 6, mRNA. ACCESSION AK290982 VERSION AK290982.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1502) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1502 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RI2013488" /clone_lib="NT2RI2" /db_xref="H-InvDB:HIT000423779" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells treated 2-weeks mitotic inhibitor after 5-weeks retinoic acid (RA) induction." /note="majorly NT2 neuron" /organism="Homo sapiens" CDS 218..1351 /codon_start=1 /note="highly similar to Homo sapiens protein tyrosine phosphatase, receptor type, O (PTPRO), transcript variant 6, mRNA" /protein_id="BAF83671.1" /transl_table=1 /translation="MVTEMNPNVVVISVLAILSTLLIGLLLVTLIILRKKHLQMAREC GAGTFVNFASLERDGKLPYNWSKNGLKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQ FEELKLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIP GYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEP IAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTANAAESIL QFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRS YRMSMVQTEEQYIFIHQCVQLMWMKKKQQFCISDVIYENVSKS" BASE COUNT 415 a 328 c 362 g 397 t ORIGIN 1 gactttgctg tgggtggaag agggagtagc tgatttcttt gaagttttct gtcaacaagt 61 tggctccagt cagaaaacca aacttcagga accagttgct gtttcttccc atgtcgtgac 121 catctccagc cttcttcctg ccactgccta caattgtagt gtcaccagct ttagccatga 181 cagccccagt gtccctacgt tcatagccgt ctcaacaatg gttacagaga tgaatcccaa 241 tgtggtagtg atctccgtgc tggccatcct tagcacactt ttaattggac tgttgcttgt 301 taccctcatt attcttagga aaaagcatct gcagatggct agggagtgtg gagctggtac 361 atttgtcaat tttgcatcct tagagaggga tggaaagctt ccatacaact ggagtaaaaa 421 tggtttaaag aagaggaaac tgacaaaccc ggttcaactg gatgactttg atgcctatat 481 taaggatatg gccaaagact ctgactataa attttctctt cagtttgagg agttgaaatt 541 gattggactg gatatcccac actttgctgc agatcttcca ctgaatcgat gtaaaaaccg 601 ttacacaaac atcctaccat atgacttcag ccgtgtgaga ttagtctcca tgaatgaaga 661 ggaaggtgca gactacatca atgccaacta tattcctgga tacaactcac cccaggagta 721 tattgccacc caggggccac tgcctgaaac cagaaatgac ttctggaaga tggtcctgca 781 acaaaagtct cagattattg tcatgctcac tcagtgtaat gagaaaagga gggtgaaatg 841 tgaccattac tggccattca cggaagaacc tatagcctat ggagacatca ctgtggagat 901 gatttcagag gaagagcagg acgactgggc ctgtagacac ttccggatca actatgctga 961 cgagatgcag gatgtgatgc attttaacta cactgcatgg cctgatcatg gtgtgcccac 1021 agcaaatgct gcagaaagta tcctgcagtt tgtacacatg gtccgacagc aagctaccaa 1081 gagcaaaggt cccatgatca ttcactgcag tgctggcgtg ggacggacag gaacattcat 1141 tgccctggac aggctcttgc agcacattcg ggatcatgag tttgttgaca tcttagggct 1201 ggtgtcagaa atgaggtcat accggatgtc tatggtacag acagaggagc agtacatttt 1261 tatccatcag tgtgtgcaac tgatgtggat gaagaagaag cagcagttct gcatcagtga 1321 tgtcatatac gagaatgtta gcaagtccta gttcagaatc cggagcagag aggacatgat 1381 gtgcgcccat cctcccttgc ttccagattg ttttagtggg ccctgatggt catttttcta 1441 aacagaggcc ctgctttgta atatgtggcc aaggagataa tttatctcac agaagcaccg 1501 gg //