LOCUS AK290980 1454 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76042 complete cds, highly similar to Homo
sapiens paraneoplastic antigen MA1 (PNMA1), mRNA.
ACCESSION AK290980
VERSION AK290980.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1454)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1454
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2013134"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000423777"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 124..1185
/codon_start=1
/note="highly similar to Homo sapiens paraneoplastic
antigen MA1 (PNMA1), mRNA"
/protein_id="BAF83669.1"
/transl_table=1
/translation="MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMP
QVSYRMLGRMFWREENAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFL
ERLHLFLAREGWTVQDVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKR
LTLFSGRDIPGPGEETFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILK
SNNPAITTAECLKALEQVFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVV
EKGAIDKDNVNQARLEQVIAGANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAK
EEEEEAEATLLQLGLEGHF"
BASE COUNT 340 a 323 c 450 g 341 t
ORIGIN
1 gtgactgcat gaaggtcgcc tccctcgggc ctacttggtg ggagtgtctg gtattgttct
61 aaggccagga gcacggtgag ccacagtctg ttggtagaat ttggcgtctt gatagttgag
121 aaaatggcga tgacactgtt ggaagactgg tgccggggga tggatgtgaa ctcccagaga
181 gctctgttag tctggggcat cccagtgaac tgtgatgagg ctgaaatcga agagaccctc
241 caggctgcga tgccccaggt ctcctaccga atgcttggga gaatgttctg gagggaagaa
301 aatgcgaaag cagccttatt agagctcact ggcgctgtag attacgccgc gatccccagg
361 gagatgccgg gcaaaggagg ggtctggaaa gtgttattta agcccccaac ttctgatgct
421 gaatttttag aaagattgca cctcttccta gctagagagg ggtggaccgt gcaagatgtt
481 gcccgtgtcc ttgggtttca gaaccctact ccgaccccgg gcccagagat gccagcagag
541 atgctaaact atattttgga taatgttatt cagcctcttg ttgagtccat atggtacaag
601 aggctgacac ttttctcggg gagggacatc ccagggcctg gagaggaaac ctttgatccc
661 tggctggagc acactaatga ggtcctagag gagtggcagg tgtccgatgt agaaaagagg
721 cggcggttga tggagagtct tagaggcccc gccgctgatg ttattcgcat ccttaagtcc
781 aacaaccccg cgataaccac tgccgaatgc ctgaaggcgc ttgagcaggt gtttgggagc
841 gttgagagct ctagggatgc ccagatcaaa tttctgaaca cttatcagaa cccgggagaa
901 aaattgtctg cttatgtcat tcgtctggag cctctgctac agaaggtggt agagaagggg
961 gccattgata aagataatgt gaaccaggcc cgcctagagc aggtcattgc cggggccaac
1021 cacagcgggg ccatccgaag gcagctgtgg cttaccgggg ctggggaagg gccagcccca
1081 aacctctttc agttgctggt gcagatccgt gaggaggaag ccaaggagga ggaggaggag
1141 gctgaggcca cccttctgca gttaggcctg gaagggcact tctgagtgcc aggaaaggca
1201 gctttagtgc agacctagat cacagctact tttcttgtcc ctgtggggtc ttacagatgt
1261 gtctctgagt agtaaaggct tagccttgtt ctgttttgtt gttttttgga ggggaaggtt
1321 agtcaggcct gagtattcat gtaacattct aaaattgtgc cagcgagcac cgtgaacgac
1381 tgcaatgcaa gcgggtcttg ctggctaaaa tgccaggtaa agggttggtt ggacacagcg
1441 cttagtgcac gctg
//